RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TERF2Q15554 542 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 SLC15A2Q16348 729 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 GKAP1Q5VSY0 366 aaPredicted RBP10.21□□□□□ -0.78
GARNL3-216ENST00000481242 RESP18Q5W5W9 173 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 TOGARAM2Q6ZUX3 1019 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 TRIM42Q8IWZ5 723 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 HEXIM2Q96MH2 286 aaKnown RBP10.21□□□□□ -0.78
GARNL3-216ENST00000481242 FTOQ9C0B1 505 aaKnown RBP eCLIP10.21□□□□□ -0.78
GARNL3-216ENST00000481242 DAAM1Q9Y4D1 1078 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 NRXN1Q9ULB1 1477 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 PGRMC1O00264 195 aaKnown RBP10.21□□□□□ -0.78
GARNL3-216ENST00000481242 MAFGO15525 162 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 SLC8A1P32418 973 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 MAGEA9P43362 315 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 TTBK2Q6IQ55 1244 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 MMS22LQ6ZRQ5 1243 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 ERICH1Q86X53 443 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF280CQ8ND82 737 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 MRPL4Q9BYD3 311 aaKnown RBP10.21□□□□□ -0.78
GARNL3-216ENST00000481242 SEPT10Q9P0V9 454 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 MID2Q9UJV3 735 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 CDC23Q9UJX2 597 aa10.21□□□□□ -0.78
GARNL3-216ENST00000481242 A0A087WUV0 522 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 MARK3P27448 753 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 SMARCA1P28370 1054 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 RASSF7Q02833 373 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 EHHADHQ08426 723 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 TAF1CQ15572 869 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 DPCR1Q3MIW9 517 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 CEP55Q53EZ4 464 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 LDHDQ86WU2 507 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 MICAL1Q8TDZ2 1067 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 RABGGTAQ92696 567 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 FAM8A1Q9UBU6 413 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 NEDD4P46934 1319 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 STXBP3O00186 592 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 TBX3O15119 743 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 TFDP2Q14188 446 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 PDIA5Q14554 519 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF568Q3ZCX4 644 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 THNSL1Q8IYQ7 743 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 RPAP3Q9H6T3 665 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 ZFYVE28Q9HCC9 887 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 DIS3Q9Y2L1 958 aaKnown RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 USH1CQ9Y6N9 552 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 USP42Q9H9J4 1324 aaKnown RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 GOLGA8SH3BPF8 625 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 DTNBO60941 627 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 INHBAP08476 426 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 R3HDM1Q15032 1099 aaKnown RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 RAB44Q7Z6P3 723 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-216ENST00000481242 OR6B3Q8NGW1 331 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 MAP3K14Q99558 947 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 MTMR4Q9NYA4 1195 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 LMCD1Q9NZU5 365 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 REREQ9P2R6 1566 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 MAD1L1Q9Y6D9 718 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 PXDNLA1KZ92 1463 aa10.2□□□□□ -0.78
GARNL3-216ENST00000481242 SYNJ2BP-COX16A0A087WUM0 186 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SART1O43290 800 aaKnown RBP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CHRNA5P30532 468 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 C1orf228Q6PIY5 440 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 USP17L6PQ6QN14 398 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ADGRF4Q8IZF3 695 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 RAET1EQ8TD07 263 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 PANX2Q96RD6 677 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 DESI2Q9BSY9 194 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 TMEM106CQ9BVX2 250 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 COX16Q9P0S2 106 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ADAMTS13Q76LX8 1427 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 MIF4GDA9UHW6 222 aaKnown RBP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 GOLGA8KD6RF30 607 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SNAP23O00161 211 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 LRRN2O75325 713 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ZWINTO95229 277 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 IRX4P78413 519 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 COG7P83436 770 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 PDE1BQ01064 536 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 PPP2R5CQ13362 524 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ATG9AQ7Z3C6 839 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SLC44A5Q8NCS7 719 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CCNYQ8ND76 341 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 RAD54LQ92698 747 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ZNF560Q96MR9 790 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 TUFT1Q9NNX1 390 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ZC3H13Q5T200 1668 aaKnown RBP10.19□□□□□ -0.78
GARNL3-216ENST00000481242 MAGEB2O15479 319 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 NTSR2O95665 410 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 CALB1P05937 261 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 GSTA1P08263 222 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 GSTA2P09210 222 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SGO2Q562F6 1265 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 ARHGEF18Q6ZSZ5 1173 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 TTC13Q8NBP0 860 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 EPSTI1Q96J88 318 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SPATA33Q96N06 139 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 SH3GL3Q99963 347 aa10.19□□□□□ -0.78
GARNL3-216ENST00000481242 MED4Q9NPJ6 270 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms