RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 UCKL1Q9NWZ5 548 aa6.95□□□□□ -1.3
UPF3A-207ENST00000481131 USP36Q9P275 1121 aaKnown RBP6.95□□□□□ -1.3
UPF3A-207ENST00000481131 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
UPF3A-207ENST00000481131 PPP2R3BQ9Y5P8 575 aa6.95□□□□□ -1.3
UPF3A-207ENST00000481131 UBA6A0AVT1 1052 aaPredicted RBP6.94□□□□□ -1.3
UPF3A-207ENST00000481131 ZNF839A8K0R7 811 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 NFIBO00712 420 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 PRLP01236 227 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 CLEC2LP0C7M8 214 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 MC3RP41968 323 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 MANFP55145 182 aaKnown RBP6.94□□□□□ -1.3
UPF3A-207ENST00000481131 FZD5Q13467 585 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 PGM2L1Q6PCE3 622 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 NME9Q86XW9 330 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 C7orf31Q8N865 590 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
UPF3A-207ENST00000481131 SYT3Q9BQG1 590 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 MYL10Q9BUA6 226 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 AMNQ9BXJ7 453 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 PRDM12Q9H4Q4 367 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 KCNK12Q9HB15 430 aa6.94□□□□□ -1.3
UPF3A-207ENST00000481131 LUC7L2Q9Y383 392 aaKnown RBP6.94□□□□□ -1.3
UPF3A-207ENST00000481131 PTGS1P23219 599 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 KRT85P78386 507 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 PFKPQ01813 784 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 ALDH6A1Q02252 535 aaKnown RBP6.93□□□□□ -1.3
UPF3A-207ENST00000481131 FSCN1Q16658 493 aaKnown RBP6.93□□□□□ -1.3
UPF3A-207ENST00000481131 RGL3Q3MIN7 710 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 CT83Q5H943 113 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 LRSAM1Q6UWE0 723 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 NOL8Q76FK4 1167 aaKnown RBP6.93□□□□□ -1.3
UPF3A-207ENST00000481131 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 CPA5Q8WXQ8 436 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 FOXB1Q99853 325 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 ANO3Q9BYT9 981 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 IRS2Q9Y4H2 1338 aa6.93□□□□□ -1.3
UPF3A-207ENST00000481131 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 PRSS38A1L453 326 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CFBP00751 764 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ATF2P15336 505 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ENPP1P22413 925 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 SLC6A3Q01959 620 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CACNB2Q08289 660 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-207ENST00000481131 PITRM1Q5JRX3 1037 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 TTC38Q5R3I4 469 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 UNQ6494/PRO21346Q6UXR6 183 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 TMC5Q6UXY8 1006 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CD300LDQ6UXZ3 194 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ESPNLQ6ZVH7 1005 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 KANSL1Q7Z3B3 1105 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 LYSMD2Q8IV50 215 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CHPFQ8IZ52 775 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 POU5F2Q8N7G0 328 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 JPH3Q8WXH2 748 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-207ENST00000481131 FAM168AQ92567 244 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 EAF2Q96CJ1 260 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-207ENST00000481131 MAML3Q96JK9 1138 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ACAP3Q96P50 834 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CAMKK2Q96RR4 588 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 TUBGCP5Q96RT8 1024 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 CNTD2Q9H8S5 307 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 MKS1Q9NXB0 559 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ARHGAP28Q9P2N2 729 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 IP6K2Q9UHH9 426 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ZNF180Q9UJW8 692 aa6.92□□□□□ -1.3
UPF3A-207ENST00000481131 ARID1BQ8NFD5 2236 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-207ENST00000481131 BIN1O00499 593 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 PRPF6O94906 941 aaKnown RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 ENO2P09104 434 aaPredicted RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 ZSCAN20P17040 1043 aaPredicted RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 RGS3P49796 1198 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 CDR1P51861 262 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 NCKAP1LP55160 1127 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 NKX3-2P78367 333 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 SRSF3P84103 164 aaKnown RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 SRSF2Q01130 221 aaKnown RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 HSP90AB2PQ58FF8 381 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 CCDC62Q6P9F0 684 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 TCF7L1Q9HCS4 588 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 LUC7LQ9NQ29 371 aaKnown RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 INCENPQ9NQS7 918 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 TMPRSS11EQ9UL52 423 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 NOB1Q9ULX3 412 aaKnown RBP6.91□□□□□ -1.3
UPF3A-207ENST00000481131 PCDHA5Q9Y5H7 936 aa6.91□□□□□ -1.3
UPF3A-207ENST00000481131 APOL3O95236 402 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 HTRA3P83110 453 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 TOR2AQ5JU69 321 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 TMEM240Q5SV17 173 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 ZNF648Q5T619 568 aaPredicted RBP6.9□□□□□ -1.3
UPF3A-207ENST00000481131 PHF19Q5T6S3 580 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 PRAMEF9Q5VWM5 478 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 OLFML2BQ68BL8 750 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 VASNQ6EMK4 673 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms