RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 DPP8Q6V1X1 898 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 CMTM5Q96DZ9 223 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 HIC2Q96JB3 615 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM167AQ96KS9 214 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 PLEKHG2Q9H7P9 1386 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 PNMA6FA0A0J9YX94 578 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 FTCDO95954 541 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 PHKA1P46020 1223 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 SERPINB9P50453 376 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 MAGOHP61326 146 aaKnown RBP6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 MAP3K10Q02779 954 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 ART3Q13508 389 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 KPNB1Q14974 876 aaKnown RBP6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 DLGAP5Q15398 846 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 KLC3Q6P597 504 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 ACAD11Q709F0 780 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 ARMCX2Q7L311 632 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 BTBD6Q96KE9 485 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 UBN1Q9NPG3 1134 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 DDX56Q9NY93 547 aaKnown RBP6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 SNX24Q9Y343 169 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 PCDHB6Q9Y5E3 794 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 MLH3Q9UHC1 1453 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 ABCA5Q8WWZ7 1642 aa6.59□□□□□ -1.36
PRPF4B-205ENST00000480058 APOA1P02647 267 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SERPINB10P48595 397 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 CEBPAP49715 358 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TTLL12Q14166 644 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 RABGAP1LQ5R372 815 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PDXDC1Q6P996 788 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PDZD8Q8NEN9 1154 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 CNKSR1Q969H4 720 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 UIMC1Q96RL1 719 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 MAGEB5Q9BZ81 275 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 CCDC134Q9H6E4 229 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PPARGC1AQ9UBK2 798 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 USP31Q70CQ4 1352 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TMPRSS15P98073 1019 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 CYLC2Q14093 348 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 MTHFD1LQ6UB35 978 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM133AQ8N9E0 248 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 POMGNT1Q8WZA1 660 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PITPNM2Q9BZ72 1349 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRIQ3A6PVS8 624 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ZBED1O96006 694 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 APOEP02649 317 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ATP5BP06576 529 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 RPSAP08865 295 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ZFXP17010 805 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 KRT4P19013 534 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PAPOLAP51003 745 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SESN3P58005 492 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SNX1Q13596 522 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 KIAA1755Q5JYT7 1200 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ENGASEQ8NFI3 743 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 OR9Q1Q8NGQ5 310 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SMCR8Q8TEV9 937 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ZFP69BQ9UJL9 534 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 RAB21Q9UL25 225 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SNX5Q9Y5X3 404 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ANKARQ7Z5J8 1434 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 EIF4G3O43432 1585 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SAMD9Q5K651 1589 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 CAPN9O14815 690 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 HGSO14964 777 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 MAN1A2O60476 641 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ESRRBO95718 433 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 JAK3P52333 1124 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ARHGDIAP52565 204 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 KRT76Q01546 638 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SUGP1Q8IWZ8 645 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 NLGN1Q8N2Q7 840 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TGFBRAP1Q8WUH2 860 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PPP1R2P1Q96PQ5 205 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 C10orf88Q9H8K7 445 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ADAM22Q9P0K1 906 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 KLHL2O95198 593 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 LARGE1O95461 756 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 KRT1P04264 644 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 MORF4L2Q15014 288 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TMED2Q15363 201 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 CERKLQ49MI3 558 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 KDM7AQ6ZMT4 941 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 GLG1Q92896 1179 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 MRRFQ96E11 262 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 NAT9Q9BTE0 207 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 FRMD8P1Q9BZ68 369 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ISCUQ9H1K1 167 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ABCF3Q9NUQ8 709 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF804BA4D1E1 1349 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 USP6P35125 1406 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 MOCS3O95396 460 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 FNTAP49354 379 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms