RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 LDHBP07195 334 aaKnown RBP22.53■■□□□ 1.2
COL13A1-208ENST00000479733 PON1P27169 355 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 RPS8P62241 208 aaKnown RBP22.53■■□□□ 1.2
COL13A1-208ENST00000479733 CNOT10Q9H9A5 744 aaKnown RBP22.53■■□□□ 1.2
COL13A1-208ENST00000479733 GPCPD1Q9NPB8 672 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 PCDHA12Q9UN75 941 aa22.53■■□□□ 1.2
COL13A1-208ENST00000479733 A0A1B0GUA9 196 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 GFPT2O94808 682 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 PLA2G4BP0C869 781 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 CDC25CP30307 473 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 CDK8P49336 464 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 TEX11Q8IYF3 940 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 HAS1Q92839 578 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 TLCD1Q96CP7 247 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 ZNF317Q96PQ6 595 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-208ENST00000479733 ATP6V0A4Q9HBG4 840 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 ARMCX3Q9UH62 379 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-208ENST00000479733 CCDC38Q502W7 563 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 C10orf76Q5T2E6 689 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 SPTY2D1Q68D10 685 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-208ENST00000479733 ATP8B4Q8TF62 1192 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 NSMCE1Q8WV22 266 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 PPP1R9AQ9ULJ8 1098 aa22.52■■□□□ 1.2
COL13A1-208ENST00000479733 BTNL10A8MVZ5 291 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 HGSO14964 777 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-208ENST00000479733 TLDC1Q6P9B6 456 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 LMBR1Q8WVP7 490 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 ERVK-5Q9HDB9 667 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 INTS9Q9NV88 658 aaKnown RBP22.51■■□□□ 1.19
COL13A1-208ENST00000479733 AMFRQ9UKV5 643 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 ITGB4P16144 1822 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 DCCP43146 1447 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 DDX3XO00571 662 aaKnown RBP eCLIP22.51■■□□□ 1.19
COL13A1-208ENST00000479733 GALCP54803 685 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 KCNQ4P56696 695 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 DR1Q01658 176 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 LRRC47Q8N1G4 583 aaKnown RBP22.51■■□□□ 1.19
COL13A1-208ENST00000479733 MAGEC3Q8TD91 643 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 SAMD15Q9P1V8 674 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 PCDHA2Q9Y5H9 948 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 LOC102724428A0A0B4J2F2 783 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 BHMG1C9JSJ3 638 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-208ENST00000479733 GHRP10912 638 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 SIK1P57059 783 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 SLC29A2Q14542 456 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 DENND2CQ68D51 928 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 AADACL2Q6P093 401 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 HOOK3Q86VS8 718 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 CLEC10AQ8IUN9 316 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 ABCF3Q9NUQ8 709 aa22.51■■□□□ 1.19
COL13A1-208ENST00000479733 SUCLA2Q9P2R7 463 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-208ENST00000479733 RGS16O15492 202 aaPredicted RBP22.5■■□□□ 1.19
COL13A1-208ENST00000479733 PPFIA2O75334 1257 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 AFPP02771 609 aaKnown RBP22.5■■□□□ 1.19
COL13A1-208ENST00000479733 KRT13P13646 458 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 STAT3P40763 770 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 PMS2P54278 862 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 SF3B3Q15393 1217 aaKnown RBP22.5■■□□□ 1.19
COL13A1-208ENST00000479733 RASGEF1CQ8N431 466 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 FBXO25Q8TCJ0 367 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 RNF25Q96BH1 459 aaPredicted RBP22.5■■□□□ 1.19
COL13A1-208ENST00000479733 FAXDC2Q96IV6 333 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 SEPT11Q9NVA2 429 aaKnown RBP22.5■■□□□ 1.19
COL13A1-208ENST00000479733 STXBP5LQ9Y2K9 1186 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 CRYMQ14894 314 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 TAX1BP1Q86VP1 789 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 GLYCTKQ8IVS8 523 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 MGARPQ8TDB4 240 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 EPB41L4BQ9H329 900 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 AGAP1Q9UPQ3 857 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 DAAM1Q9Y4D1 1078 aa22.5■■□□□ 1.19
COL13A1-208ENST00000479733 NBPF9Q3BBW0 867 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 VPS36Q86VN1 386 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 P3H4Q92791 437 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 RSRC1Q96IZ7 334 aaKnown RBP22.49■■□□□ 1.19
COL13A1-208ENST00000479733 GPR101Q96P66 508 aaPredicted RBP22.49■■□□□ 1.19
COL13A1-208ENST00000479733 ADAM7Q9H2U9 754 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 BZW2Q9Y6E2 419 aaKnown RBP22.49■■□□□ 1.19
COL13A1-208ENST00000479733 CLGNO14967 610 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 XRCC5P13010 732 aaKnown RBP22.49■■□□□ 1.19
COL13A1-208ENST00000479733 EIF3BP55884 814 aaKnown RBP22.49■■□□□ 1.19
COL13A1-208ENST00000479733 KCNJ2P63252 427 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 LRRC14Q15048 493 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 NEK9Q8TD19 979 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 ATXN2LQ8WWM7 1075 aaKnown RBP22.49■■□□□ 1.19
COL13A1-208ENST00000479733 BCAS3Q9H6U6 928 aa22.49■■□□□ 1.19
COL13A1-208ENST00000479733 CCDC189A1A4V9 331 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 MEIS1O00470 390 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 CLIC2O15247 247 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 MARSP56192 900 aaKnown RBP22.48■■□□□ 1.19
COL13A1-208ENST00000479733 DCAF12L1Q5VU92 463 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 TRPM8Q7Z2W7 1104 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 SLC35G2Q8TBE7 412 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 EPS8L3Q8TE67 593 aaKnown RBP22.48■■□□□ 1.19
COL13A1-208ENST00000479733 HES6Q96HZ4 224 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 RAB17Q9H0T7 212 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 SEMA4AQ9H3S1 761 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 TMOD4Q9NZQ9 345 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
COL13A1-208ENST00000479733 RREB1Q92766 1687 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms