RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
DDX56-211ENST00000479602 LOXHD1Q8IVV2 1947 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 C17orf102A2RUQ5 167 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 IPO5O00410 1097 aaKnown RBP10.04□□□□□ -0.8
DDX56-211ENST00000479602 NEMFO60524 1076 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 ATP9AO75110 1047 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 PPFIA3O75145 1194 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 F13A1P00488 732 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 SFNP31947 248 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 TOB1P50616 345 aaPredicted RBP10.04□□□□□ -0.8
DDX56-211ENST00000479602 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDX56-211ENST00000479602 SPIRE1Q08AE8 756 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 TTC38Q5R3I4 469 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 FAM43BQ6ZT52 329 aaPredicted RBP10.04□□□□□ -0.8
DDX56-211ENST00000479602 NEK9Q8TD19 979 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 KHSRPQ92945 711 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDX56-211ENST00000479602 EPHX3Q9H6B9 360 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 DDX25Q9UHL0 483 aaKnown RBP10.04□□□□□ -0.8
DDX56-211ENST00000479602 ARIH1Q9Y4X5 557 aaPredicted RBP10.04□□□□□ -0.8
DDX56-211ENST00000479602 PPME1Q9Y570 386 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 TANC1Q9C0D5 1861 aa10.04□□□□□ -0.8
DDX56-211ENST00000479602 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 TCF20Q9UGU0 1960 aaKnown RBP10.03□□□□□ -0.8
DDX56-211ENST00000479602 GSTTP1A0A1W2PQM5 241 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 MBLAC1A4D2B0 266 aaPredicted RBP10.03□□□□□ -0.8
DDX56-211ENST00000479602 MSH4O15457 936 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 YEATS4O95619 227 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 CHRNA1P02708 482 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 THPOP40225 353 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 CHMP4BP1P59074 171 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 PDIA5Q14554 519 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 LEXMQ3ZCV2 418 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 MARCH8Q5T0T0 291 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 CYFIP1Q7L576 1253 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 PLA2G4DQ86XP0 818 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 C4orf32Q8N8J7 132 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 IGSF22Q8N9C0 903 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.03□□□□□ -0.8
DDX56-211ENST00000479602 HAS1Q92839 578 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 ATP6V0A1Q93050 837 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 AK8Q96MA6 479 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
DDX56-211ENST00000479602 C17orf80Q9BSJ5 609 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 C1QTNF1Q9BXJ1 281 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 RC3H2Q9HBD1 1191 aaKnown RBP10.03□□□□□ -0.8
DDX56-211ENST00000479602 JPH1Q9HDC5 661 aaPredicted RBP10.03□□□□□ -0.8
DDX56-211ENST00000479602 SETD4Q9NVD3 440 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 RTEL1Q9NZ71 1219 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 RAPGEFL1Q9UHV5 662 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 VAV3Q9UKW4 847 aa10.03□□□□□ -0.8
DDX56-211ENST00000479602 VPS37CA5D8V6 355 aaPredicted RBP10.02□□□□□ -0.81
DDX56-211ENST00000479602 C5orf67F2Z3F1 127 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 PI4K2BG5E9Z4 385 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 H3BNC9 293 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 SLC37A4O43826 429 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 GPR37L1O60883 481 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 PPP6R2O75170 966 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 LYPLA2O95372 231 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 TDP2O95551 362 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 OR52Z1P0C646 297 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 JAK3P52333 1124 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 MGAT3Q09327 533 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 ITGB3BPQ13352 177 aaPredicted RBP10.02□□□□□ -0.81
DDX56-211ENST00000479602 GNL2Q13823 731 aaKnown RBP10.02□□□□□ -0.81
DDX56-211ENST00000479602 LETM2Q2VYF4 491 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 PLPPR4Q7Z2D5 763 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 GDPD5Q8WTR4 605 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 PCYT2Q99447 389 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 SDF4Q9BRK5 362 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 ZNF577Q9BSK1 485 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 SLC9A2Q9UBY0 812 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 ZDHHC9Q9Y397 364 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 NRCAMQ92823 1304 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 IGSF9BQ9UPX0 1349 aa10.02□□□□□ -0.81
DDX56-211ENST00000479602 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 WDR64B1ANS9 1081 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 ENPP3O14638 875 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 SORBS3O60504 671 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 CCNT1O60563 726 aaKnown RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDX56-211ENST00000479602 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 AMHP03971 560 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 RPLP2P05387 115 aaKnown RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 ARP10275 920 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 ZNF76P36508 570 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 GUCY1B3Q02153 619 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 SLC39A14Q15043 492 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 PTPAQ15257 358 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 PRR16Q569H4 304 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 ABHD15Q6UXT9 468 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 RTN4RL1Q86UN2 441 aaPredicted RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 FAM178BQ8IXR5 827 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 CYP2W1Q8TAV3 490 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms