RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
C9orf3-217ENST00000479161 CDC42EP1Q00587 391 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 MGAT3Q09327 533 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 ZNF174Q15697 407 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 PLEKHG4Q58EX7 1191 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 MCTP1Q6DN14 999 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 RUFY4Q6ZNE9 571 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 LINC01465Q8N7H1 131 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 APBB2Q92870 758 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 CEP89Q96ST8 783 aa17.36■□□□□ 0.37
C9orf3-217ENST00000479161 JPH2Q9BR39 696 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-217ENST00000479161 LOXHD1Q8IVV2 1947 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 IGKV6-21A0A0C4DH24 114 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 SLITRK3O94933 977 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 BMP15O95972 392 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 CHRNA1P02708 482 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 ACRP10323 421 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 SYT1P21579 422 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 TMOD1P28289 359 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 IGBP1P78318 339 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 MRPS6P82932 125 aaKnown RBP17.35■□□□□ 0.37
C9orf3-217ENST00000479161 FAM109BQ6ICB4 259 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-217ENST00000479161 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 KIAA0319LQ8IZA0 1049 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 DNAJB3Q8WWF6 145 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 MICAL3Q7RTP6 2002 aa17.35■□□□□ 0.37
C9orf3-217ENST00000479161 SIP14410 1827 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 ATP2B1P20020 1258 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 PTGDRQ13258 359 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-217ENST00000479161 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
C9orf3-217ENST00000479161 ANO5Q75V66 913 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 DEFB128Q7Z7B8 93 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 KCTD17Q8N5Z5 321 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 TRAPPC12Q8WVT3 735 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 EIF2AK1Q9BQI3 630 aaKnown RBP17.34■□□□□ 0.37
C9orf3-217ENST00000479161 LXNQ9BS40 222 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-217ENST00000479161 RAB34Q9BZG1 259 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 TUFT1Q9NNX1 390 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 ANKEF1Q9NU02 776 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
C9orf3-217ENST00000479161 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 M0QZ92 97 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 GAS2O43903 313 aaKnown RBP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 MAFO75444 373 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 RPA1P27694 616 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 ATP2C1P98194 919 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 TBC1D8BQ0IIM8 1120 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 IKBKEQ14164 716 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 IGSF22Q8N9C0 903 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 BANK1Q8NDB2 785 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 ERMNQ8TAM6 284 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 SEPT8Q92599 483 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 SLC9A7Q96T83 725 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 ZSCAN16Q9H4T2 348 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 CYP26B1Q9NR63 512 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 TRPV2Q9Y5S1 764 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.36
C9orf3-217ENST00000479161 MORC2Q9Y6X9 1032 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-217ENST00000479161 YWHABP31946 246 aaKnown RBP17.32■□□□□ 0.36
C9orf3-217ENST00000479161 RFC5P40937 340 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 FBXO47Q5MNV8 452 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 ODR4Q5SWX8 454 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 OTOP2Q7RTS6 562 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 DYDC2Q96IM9 177 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 DHX33Q9H6R0 707 aaKnown RBP17.32■□□□□ 0.36
C9orf3-217ENST00000479161 RGL1Q9NZL6 768 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 WRAP73Q9P2S5 460 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-217ENST00000479161 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 COL6A3P12111 3177 aa17.32■□□□□ 0.36
C9orf3-217ENST00000479161 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 DDX11L8A8MPP1 907 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 SLC26A4O43511 780 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 STX6O43752 255 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 SPATA31C1P0DKV0 1188 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 TECP42680 631 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 DNM2P50570 870 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-217ENST00000479161 HAUS3Q68CZ6 603 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 TSHZ1Q6ZSZ6 1077 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 DBF4BQ8NFT6 615 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 MAP7D2Q96T17 732 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 CXXC1Q9P0U4 656 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-217ENST00000479161 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-217ENST00000479161 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
C9orf3-217ENST00000479161 TTC3P53804 2025 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 POTEMA6NI47 508 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 SOX1O00570 391 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-217ENST00000479161 CTSHP09668 335 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 LPIN1Q14693 890 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 DTHD1Q6ZMT9 781 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 CATSPER3Q86XQ3 398 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms