RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 MAPK6Q16659 721 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 HAUS1Q96CS2 278 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 SH2D3AQ9BRG2 576 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ZNF70Q9UC06 446 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-208ENST00000478423 TUBE1Q9UJT0 475 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 USP27XA6NNY8 438 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 RSBN1LQ6PCB5 846 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-208ENST00000478423 RSPH3Q86UC2 560 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 GABPB2Q8TAK5 448 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-208ENST00000478423 CCDC110Q8TBZ0 833 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 FAM151AQ8WW52 585 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 FAM193BQ96PV7 902 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ZMYND12Q9H0C1 365 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 POLLQ9UGP5 575 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 INPP5BP32019 993 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 PSMC5P62195 406 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 SNX1Q13596 522 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 MTMR2Q13614 643 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 PDS5AQ29RF7 1337 aaKnown RBP15.36■□□□□ 0.05
NPHP4-208ENST00000478423 PPFIA4O75335 1185 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 SARNPP82979 210 aaKnown RBP15.36■□□□□ 0.05
NPHP4-208ENST00000478423 STK4Q13043 487 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 EPHA7Q15375 998 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
NPHP4-208ENST00000478423 LDHAP00338 332 aaKnown RBP15.36■□□□□ 0.05
NPHP4-208ENST00000478423 EPHB4P54760 987 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 PBKQ96KB5 322 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.36■□□□□ 0.057e-12■■■■□ 24.5
NPHP4-208ENST00000478423 ZSCAN26Q16670 478 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 MAP3K14Q99558 947 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
NPHP4-208ENST00000478423 PSMD14O00487 310 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 NEDD9Q14511 834 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 SURF1Q15526 300 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 NME8Q8N427 588 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 TBC1D31Q96DN5 1066 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 FAM213AQ9BRX8 229 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 PCDHA10Q9Y5I2 948 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 GOLGA8KD6RF30 607 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 EYA4O95677 639 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 CLCN6P51797 869 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
NPHP4-208ENST00000478423 NFIAQ12857 509 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 NFX1Q12986 1120 aaKnown RBP15.35■□□□□ 0.05
NPHP4-208ENST00000478423 ADSSL1Q8N142 457 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 BCAS4Q8TDM0 211 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 PSPC1Q8WXF1 523 aaKnown RBP15.35■□□□□ 0.05
NPHP4-208ENST00000478423 FAM167AQ96KS9 214 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 A6NJR5 290 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 TRIM49P0CI25 452 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 TRIM49CP0CI26 452 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 DPYDQ12882 1025 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 MAP7D1Q3KQU3 841 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 FAM114A2Q9NRY5 505 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 ATP8A1Q9Y2Q0 1164 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 GBP1P32455 592 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 SLC7A5Q01650 507 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-208ENST00000478423 CATSPER4Q7RTX7 472 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 BBOF1Q8ND07 529 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 AP1M1Q9BXS5 423 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 CALN1Q9BXU9 219 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 TMEM39BQ9GZU3 492 aa15.35■□□□□ 0.05
NPHP4-208ENST00000478423 LMNB2Q03252 620 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 COG2Q14746 738 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 C3orf67Q6ZVT6 689 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 HAUS6Q7Z4H7 955 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 RHOT2Q8IXI1 618 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 LPAR1Q92633 364 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 ZNF668Q96K58 619 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 RUNDC3BQ96NL0 473 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 A0A1W2PQC6 194 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 LRRD1A4D1F6 860 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 HSPA6P17066 643 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 MAN1A1P33908 653 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 PHBP35232 272 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 BAATQ14032 418 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 MTF1Q14872 753 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 R3HDM1Q15032 1099 aaKnown RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 PRAMEF18Q5VWM3 479 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 FBXO38Q6PIJ6 1188 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 PDZD4Q76G19 769 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 GIMAP8Q8ND71 665 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 RAB3IL1Q8TBN0 382 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
NPHP4-208ENST00000478423 CD2APQ9Y5K6 639 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 BCL9O00512 1426 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 SGK1O00141 431 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 SRGAP2O75044 1071 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 PSMC4P43686 418 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 SLC15A2Q16348 729 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 CAPS2Q9BXY5 557 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms