RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TMEM139Q8IV31 216 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 FMNL3Q8IVF7 1028 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CCDC170Q8IYT3 715 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 GJA10Q969M2 543 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 HVCN1Q96D96 273 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CDCA5Q96FF9 252 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 DRC1Q96MC2 740 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 DNAJC7Q99615 494 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 KCTD10Q9H3F6 313 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 NDST4Q9H3R1 872 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 ST6GALNAC4Q9H4F1 302 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 TMEM206Q9H813 350 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 MRPL44Q9H9J2 332 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 HOMER2Q9NSB8 354 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 RGL1Q9NZL6 768 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 AGTPBP1Q9UPW5 1226 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 SLC45A1Q9Y2W3 748 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 R3HCC1Q9Y3T6 440 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 PPME1Q9Y570 386 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 PCDHA10Q9Y5I2 948 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 RBBP6Q7Z6E9 1792 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 SPATA31C2B4DYI2 1134 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 H0YCG3 227 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 PES1O00541 588 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 CHMP2AO43633 222 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 IPO7O95373 1038 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 PSAPP07602 524 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 TGFB3P10600 412 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MYCLP12524 364 aaPredicted RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 HNRNPH3P31942 346 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 CASP14P31944 242 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 GTF2F1P35269 517 aaKnown RBP eCLIP8.75□□□□□ -1.01
VMA21-203ENST00000477649 ADKP55263 362 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 PSMC6P62333 389 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 ETF1P62495 437 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 UBXN2AP68543 259 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 ADAM9Q13443 819 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 TUBB2AQ13885 445 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MEA1Q16626 185 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MIIPQ5JXC2 388 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 ZNF662Q6ZS27 426 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 SFR1Q86XK3 245 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 CREBRFQ8IUR6 639 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 FAM178BQ8IXR5 827 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MYCT1Q8N699 235 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 SHCBP1Q8NEM2 672 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MYRIPQ8NFW9 859 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 SYN2Q92777 582 aaPredicted RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 PPP1R13BQ96KQ4 1090 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 TUBB2BQ9BVA1 445 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 RUSC1Q9BVN2 902 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MOV10L1Q9BXT6 1211 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 ZHX3Q9H4I2 956 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 A1CFQ9NQ94 594 aaKnown RBP8.75□□□□□ -1.01
VMA21-203ENST00000477649 ABHD10Q9NUJ1 306 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 MYO1AQ9UBC5 1043 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 PPP2R2CQ9Y2T4 447 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 SAMM50Q9Y512 469 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 RIPK3Q9Y572 518 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 LOXHD1Q8IVV2 1947 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 PHLPP2Q6ZVD8 1323 aa8.75□□□□□ -1.01
VMA21-203ENST00000477649 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 GTPBP10A4D1E9 387 aaKnown RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 ADM5C9JUS6 153 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 DYNC1I1O14576 645 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 GCNT3O95395 438 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 EPB41P11171 864 aaKnown RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 RARRES1P49788 294 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 RTP1P59025 263 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 KRT83P78385 493 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 ENPEPQ07075 957 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 ITGB3BPQ13352 177 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 SNAPC2Q13487 334 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 PLS1Q14651 629 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 SYCP1Q15431 976 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 LDLRAD1Q5T700 205 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 MIS18BP1Q6P0N0 1132 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 ZNF720Q7Z2F6 126 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 TRIM59Q8IWR1 403 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 C12orf56Q8IXR9 622 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 ANKRD35Q8N283 1001 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 ZNF784Q8NCA9 323 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 MCPH1Q8NEM0 835 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 IL31RAQ8NI17 732 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 KIFAP3Q92845 792 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 KCNN1Q92952 543 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 VTI1AQ96AJ9 217 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 C16orf45Q96MC5 204 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 PCMTD1Q96MG8 357 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 TTYH3Q9C0H2 523 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 SPATC1LQ9H0A9 340 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 MROH8Q9H579 483 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 TAF1DQ9H5J8 278 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 JPH1Q9HDC5 661 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms