RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 SUN1O94901 812 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 AGTP01019 485 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 PDHA1P08559 390 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 ITGA4P13612 1032 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 CALB2P22676 271 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 GBP1P32455 592 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 IFI35P80217 286 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 OLFML1Q6UWY5 402 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 GET4Q7L5D6 327 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 RASGEF1CQ8N431 466 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 LRRC57Q8N9N7 239 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 KIAA0895Q8NCT3 520 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 OPTNQ96CV9 577 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 IFT43Q96FT9 208 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 PABPC3Q9H361 631 aaKnown RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 CUEDC2Q9H467 287 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 RNF41Q9H4P4 317 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 RXFP1Q9HBX9 757 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 CEP72Q9P209 647 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 UTP11Q9Y3A2 253 aaKnown RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 GLI3P10071 1580 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 A0A087X0T9 212 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 PDLIM1O00151 329 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 PRKAB2O43741 272 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 VIL1P09327 827 aaKnown RBP11.44□□□□□ -0.58
ABCF1-205ENST00000475993 FAM228BP0C875 321 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 UBA7P41226 1012 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 LMNB2Q03252 620 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 CNGA2Q16280 664 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 DTHD1Q6ZMT9 781 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 COL23A1Q86Y22 540 aaPredicted RBP11.44□□□□□ -0.58
ABCF1-205ENST00000475993 SDR16C5Q8N3Y7 309 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 METTL13Q8N6R0 699 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 SLC35B4Q969S0 331 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 DHRS1Q96LJ7 313 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 PLIN2Q99541 437 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 CTNNAL1Q9UBT7 734 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 LNPEPQ9UIQ6 1025 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 TRIM33Q9UPN9 1127 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 PNPLA7Q6ZV29 1317 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 RGS16O15492 202 aaPredicted RBP11.44□□□□□ -0.58
ABCF1-205ENST00000475993 PFDN1O60925 122 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 NOL4O94818 638 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 ACADSP16219 412 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
ABCF1-205ENST00000475993 PABPC1LQ4VXU2 614 aaKnown RBP11.44□□□□□ -0.58
ABCF1-205ENST00000475993 TNFAIP8L3Q5GJ75 292 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 FITM2Q8N6M3 262 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 UTP4Q969X6 686 aaKnown RBP11.44□□□□□ -0.58
ABCF1-205ENST00000475993 NDNQ99608 321 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 DPH5Q9H2P9 285 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 AZI2Q9H6S1 392 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 CNTNAP5Q8WYK1 1306 aa11.44□□□□□ -0.58
ABCF1-205ENST00000475993 BAG3O95817 575 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 PCK1P35558 622 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 IFNAR2P48551 515 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 NLRP5P59047 1200 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 KLC1Q07866 573 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 KCTD19Q17RG1 926 aaPredicted RBP11.43□□□□□ -0.58
ABCF1-205ENST00000475993 FAM83BQ5T0W9 1011 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 CCDC80Q76M96 950 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 ENAHQ8N8S7 591 aaPredicted RBP11.43□□□□□ -0.58
ABCF1-205ENST00000475993 NEK9Q8TD19 979 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 FBF1Q8TES7 1133 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
ABCF1-205ENST00000475993 CORO1BQ9BR76 489 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 CELF4Q9BZC1 486 aaKnown RBP11.43□□□□□ -0.58
ABCF1-205ENST00000475993 NLRC4Q9NPP4 1024 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 ZDHHC18Q9NUE0 388 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 PRKAG3Q9UGI9 489 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 ARL2BPQ9Y2Y0 163 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 PEX11AO75192 247 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 TPBGLP0DKB5 382 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 PHKG2P15735 406 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 PEX5P50542 639 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 BPIFB4P59827 614 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 ASIC1P78348 528 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 TROAPQ12815 778 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 METTL24Q5JXM2 366 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 CNNM4Q6P4Q7 775 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 TMEM154Q6P9G4 183 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 RAB3IPQ96QF0 476 aaPredicted RBP11.43□□□□□ -0.58
ABCF1-205ENST00000475993 RPS6KC1Q96S38 1066 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 NACAP1Q9BZK3 213 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 FGFR1OP2Q9NVK5 253 aa11.43□□□□□ -0.58
ABCF1-205ENST00000475993 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.43□□□□□ -0.588e-7■■■■■ 40.9
ABCF1-205ENST00000475993 ATXN10Q9UBB4 475 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms