RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 METTL7BQ6UX53 244 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 FEZF2Q8TBJ5 459 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 IL25Q9H293 177 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 TMX1Q9H3N1 280 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 TUBE1Q9UJT0 475 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 KRBA1A5PL33 1030 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 SGSM2O43147 1006 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 NARSO43776 548 aaKnown RBP16.19■□□□□ 0.18
ATG9A-220ENST00000475339 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
ATG9A-220ENST00000475339 PLCB3Q01970 1234 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 SP4Q02446 784 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 PPFIA1Q13136 1202 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 ACAP1Q15027 740 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 VARS2Q5ST30 1063 aaKnown RBP16.19■□□□□ 0.18
ATG9A-220ENST00000475339 KIAA1841Q6NSI8 718 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 TBC1D10CQ8IV04 446 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 COL26A1Q96A83 441 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 ZBTB10Q96DT7 871 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 FAM49AQ9H0Q0 323 aaPredicted RBP16.19■□□□□ 0.18
ATG9A-220ENST00000475339 KCNK12Q9HB15 430 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 NCDNQ9UBB6 729 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 FANCMQ8IYD8 2048 aa16.19■□□□□ 0.18
ATG9A-220ENST00000475339 CLASP2O75122 1294 aaKnown RBP16.18■□□□□ 0.18
ATG9A-220ENST00000475339 DCNP07585 359 aaKnown RBP16.18■□□□□ 0.18
ATG9A-220ENST00000475339 CFHP08603 1231 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 RFX1P22670 979 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 CCND2P30279 289 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
ATG9A-220ENST00000475339 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 TMEM62Q0P6H9 643 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 PAK2Q13177 524 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 COL9A3Q14050 684 aaPredicted RBP16.18■□□□□ 0.18
ATG9A-220ENST00000475339 NEDD9Q14511 834 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 MARCH8Q5T0T0 291 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 ESR2Q92731 530 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 TTC14Q96N46 770 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 CWH43Q9H720 699 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 VAT1LQ9HCJ6 419 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 SQORQ9Y6N5 450 aa16.18■□□□□ 0.18
ATG9A-220ENST00000475339 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
ATG9A-220ENST00000475339 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
ATG9A-220ENST00000475339 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
ATG9A-220ENST00000475339 CDC45O75419 566 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 NT5C2P49902 561 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 GRIK4Q16099 956 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 IER5Q5VY09 327 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 XRRA1Q6P2D8 792 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 C1orf210Q8IVY1 113 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 MRPL43Q8N983 215 aaKnown RBP16.17■□□□□ 0.18
ATG9A-220ENST00000475339 ACSF2Q96CM8 615 aaPredicted RBP16.17■□□□□ 0.18
ATG9A-220ENST00000475339 RTKNQ9BST9 563 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 NEDD4P46934 1319 aa16.17■□□□□ 0.18
ATG9A-220ENST00000475339 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
ATG9A-220ENST00000475339 ZFYVE26Q68DK2 2539 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 C2orf71A6NGG8 1288 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 PRR5-ARHGAP8B1AHC4 643 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 DHX16O60231 1041 aaKnown RBP16.16■□□□□ 0.18
ATG9A-220ENST00000475339 LAG3P18627 525 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 MARK3P27448 753 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 PBX3P40426 434 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 ARHGAP8P85298 464 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 GHRHRQ02643 423 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 LMNB2Q03252 620 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 SEMA3FQ13275 785 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 GPR161Q8N6U8 529 aaKnown RBP16.16■□□□□ 0.18
ATG9A-220ENST00000475339 ESYT1Q9BSJ8 1104 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 JMJD4Q9H9V9 463 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 TBC1D17Q9HA65 648 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
ATG9A-220ENST00000475339 WNT16Q9UBV4 365 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 CA14Q9ULX7 337 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
ATG9A-220ENST00000475339 POTEMA6NI47 508 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 SPATA31C2B4DYI2 1134 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 MGEA5O60502 916 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 FGFR1P11362 822 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 IGBP1P78318 339 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 PTH1RQ03431 593 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 NFX1Q12986 1120 aaKnown RBP16.15■□□□□ 0.18
ATG9A-220ENST00000475339 TRDNQ13061 729 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 SMC1AQ14683 1233 aaKnown RBP16.15■□□□□ 0.18
ATG9A-220ENST00000475339 GNPTABQ3T906 1256 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 POTEGQ6S5H5 508 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 TMC5Q6UXY8 1006 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 OTOP3Q7RTS5 596 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 KRT23Q9C075 422 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 DLGAP2Q9P1A6 1054 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 PCDHA1Q9Y5I3 950 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 TRPV2Q9Y5S1 764 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 LAMA4Q16363 1823 aa16.15■□□□□ 0.18
ATG9A-220ENST00000475339 DOCK5Q9H7D0 1870 aa16.14■□□□□ 0.17
ATG9A-220ENST00000475339 MRPS9P82933 396 aaKnown RBP16.14■□□□□ 0.17
ATG9A-220ENST00000475339 KRT17Q04695 432 aa16.14■□□□□ 0.17
ATG9A-220ENST00000475339 KCNT2Q6UVM3 1135 aa16.14■□□□□ 0.17
ATG9A-220ENST00000475339 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms