RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZMYND12Q9H0C1 365 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 BSDC1Q9NW68 430 aaPredicted RBP11.78□□□□□ -0.52
VAPB-204ENST00000475243 ABCB11O95342 1321 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 PSMD2Q13200 908 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 FAM160B2Q86V87 743 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 HIPK4Q8NE63 616 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.522e-8■□□□□ 10.4
VAPB-204ENST00000475243 ZBBXA8MT70 800 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 SRGAP2O75044 1071 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 CCNE1P24864 410 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 SLC8A1P32418 973 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 NNTQ13423 1086 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
VAPB-204ENST00000475243 MB21D1Q8N884 522 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 NFU1Q9UMS0 254 aa11.78□□□□□ -0.52
VAPB-204ENST00000475243 SYNDIG1LA6NDD5 238 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 TRIM49BA6NDI0 452 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 KITP10721 976 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.52
VAPB-204ENST00000475243 C1orf228Q6PIY5 440 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 SPATS2Q86XZ4 545 aaKnown RBP11.77□□□□□ -0.52
VAPB-204ENST00000475243 PRDX5P30044 214 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 TMC4Q7Z404 712 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 TRIM42Q8IWZ5 723 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 PARD6BQ9BYG5 372 aa11.77□□□□□ -0.52
VAPB-204ENST00000475243 ZBED6P86452 979 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 CREB3O43889 395 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 RESTQ13127 1097 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 KLC3Q6P597 504 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 PRPF38AQ8NAV1 312 aaKnown RBP11.77□□□□□ -0.53
VAPB-204ENST00000475243 WRNIP1Q96S55 665 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 FAM213AQ9BRX8 229 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 COA1Q9GZY4 146 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 OSBPL3Q9H4L5 887 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 UGGT1Q9NYU2 1555 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 PALMO75781 387 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 GCLMP48507 274 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ANKRD20A4Q4UJ75 823 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ANKRD20A8PQ5CZ79 823 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ANKRD20A2Q5SQ80 823 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ANKRD20A1Q5TYW2 823 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 KLHL29Q96CT2 875 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 CYTH2Q99418 400 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 RASGRF2O14827 1237 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 FGGP02679 453 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ASNSP08243 561 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 APBA1Q02410 837 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ANO4Q32M45 955 aa11.77□□□□□ -0.53
VAPB-204ENST00000475243 ALKBH5Q6P6C2 394 aaKnown RBP11.76□□□□□ -0.53
VAPB-204ENST00000475243 TMEM179Q6ZVK1 233 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 FRA10AC1Q70Z53 315 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 TTC7AQ9ULT0 858 aaPredicted RBP11.76□□□□□ -0.53
VAPB-204ENST00000475243 PHLPP2Q6ZVD8 1323 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 IGSF1Q8N6C5 1336 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 TJP3O95049 919 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 CYB5R4Q7L1T6 521 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
VAPB-204ENST00000475243 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 CENPUQ71F23 418 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 CYFIP1Q7L576 1253 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 SARS2Q9NP81 518 aaKnown RBP11.76□□□□□ -0.53
VAPB-204ENST00000475243 KLHL8Q9P2G9 620 aaPredicted RBP11.76□□□□□ -0.53
VAPB-204ENST00000475243 NEDD4P46934 1319 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 LRRC63Q05C16 580 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ZNF568Q3ZCX4 644 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 THEM5Q8N1Q8 247 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 MORC4Q8TE76 937 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 CIITAP33076 1130 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ABCD1P33897 745 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 SURF1Q15526 300 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 AFG1LQ8WV93 481 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 PNMA3Q9UL41 463 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
VAPB-204ENST00000475243 MYL1P05976 194 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 CA4P22748 312 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 SEPT2Q15019 361 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 VSTM4Q8IW00 320 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 SIRT2Q8IXJ6 389 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 SAYSD1Q9NPB0 183 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 DNAJC12Q9UKB3 198 aa11.76□□□□□ -0.53
VAPB-204ENST00000475243 SLC16A4O15374 487 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 KRT10P13645 584 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 TMEM270Q6UE05 265 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 FSD1LQ9BXM9 530 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms