RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-206ENST00000474564 NIFKQ9BYG3 293 aaKnown RBP11.5□□□□□ -0.57
COL12A1-206ENST00000474564 ANO10Q9NW15 660 aa11.5□□□□□ -0.57
COL12A1-206ENST00000474564 ODF2LQ9ULJ1 636 aa11.5□□□□□ -0.57
COL12A1-206ENST00000474564 KIAA1217Q5T5P2 1943 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 A0A087X0B3 334 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 KBTBD13C9JR72 458 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 MAGEB2O15479 319 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 RPN1P04843 607 aaKnown RBP11.49□□□□□ -0.57
COL12A1-206ENST00000474564 CCND3P30281 292 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-206ENST00000474564 SMTNP53814 917 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 SLC12A3P55017 1021 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 CHMP4BP1P59074 171 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 ZNF445P59923 1031 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 PNOCQ13519 176 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 MTERF2Q49AM1 385 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 NAALADL2Q58DX5 795 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-206ENST00000474564 DYMQ7RTS9 669 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 DDX12PQ92771 950 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 STAMQ92783 540 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 KIFAP3Q92845 792 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 IFT74Q96LB3 600 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 BCAS3Q9H6U6 928 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 ATP6V0A4Q9HBG4 840 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 CYP26B1Q9NR63 512 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 BLOC1S4Q9NUP1 217 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 PANK4Q9NVE7 773 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 LARSQ9P2J5 1176 aaKnown RBP11.49□□□□□ -0.57
COL12A1-206ENST00000474564 PCDHA5Q9Y5H7 936 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 IGSF9BQ9UPX0 1349 aa11.49□□□□□ -0.57
COL12A1-206ENST00000474564 LCTP09848 1927 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 CASP8AP2Q9UKL3 1982 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 H0YCG3 227 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 CYP11B2P19099 503 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 SCP2P22307 547 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 MARK3P27448 753 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
COL12A1-206ENST00000474564 RARRES1P49788 294 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 PSMC6P62333 389 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 CDC42EP1Q00587 391 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 KCNB1Q14721 858 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 PPP2R5AQ15172 486 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 ECM1Q16610 540 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 STX1AQ16623 288 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 HERC4Q5GLZ8 1057 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-206ENST00000474564 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 UNC13DQ70J99 1090 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 SH3RF1Q7Z6J0 888 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 C7orf31Q8N865 590 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 MLKLQ8NB16 471 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 TRPV1Q8NER1 839 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 TSEN34Q9BSV6 310 aaKnown RBP11.48□□□□□ -0.57
COL12A1-206ENST00000474564 SEZ6LQ9BYH1 1024 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 TRIM9Q9C026 710 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL12A1-206ENST00000474564 RNF208Q9H0X6 261 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 UPF3AQ9H1J1 476 aaKnown RBP11.48□□□□□ -0.57
COL12A1-206ENST00000474564 BLZF1Q9H2G9 400 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 C17orf75Q9HAS0 396 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 SEL1LQ9UBV2 794 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 COL1A2P08123 1366 aa11.48□□□□□ -0.57
COL12A1-206ENST00000474564 NRCAMQ92823 1304 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 SYNRGQ9UMZ2 1314 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 MOXD2PA6NHM9 499 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 USO1O60763 962 aaKnown RBP11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PGK1P00558 417 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
COL12A1-206ENST00000474564 HOXD8P13378 290 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PSEN2P49810 448 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 TPM4P67936 248 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 NKX3-2P78367 333 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-206ENST00000474564 DPYDQ12882 1025 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 TRIM32Q13049 653 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PPFIA1Q13136 1202 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 CUL4BQ13620 913 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 MFSD10Q14728 455 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PLCB4Q15147 1175 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 UGCGQ16739 394 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 CT47A1Q5JQC4 288 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-206ENST00000474564 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 ANO5Q75V66 913 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 MYCT1Q8N699 235 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 GLT1D1Q96MS3 346 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 MTRQ99707 1265 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PARVGQ9HBI0 331 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
COL12A1-206ENST00000474564 PHLPP2Q6ZVD8 1323 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 A0A087WWV3 80 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 MYMKA6NI61 221 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 ASAP2O43150 1006 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 ZNF862O60290 1169 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
COL12A1-206ENST00000474564 CCL5P13501 91 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms