RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IFT57Q9NWB7 429 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 ARHGAP28Q9P2N2 729 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 ASB1Q9Y576 335 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 PTPDC1A2A3K4 754 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 PRAMEF25A6NGN4 478 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 ZNF839A8K0R7 811 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 GSG1L2A8MUP6 293 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 MAFGO15525 162 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 KPNA6O60684 536 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 F2P00734 622 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 C4BPAP04003 597 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 VIL1P09327 827 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 THBS2P35442 1172 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 GRIN1Q05586 938 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 DBPQ10586 325 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 FHL2Q14192 279 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 BORAQ6PGQ7 559 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 KRT26Q7Z3Y9 468 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 EFHBQ8N7U6 833 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 DTX3Q8N9I9 347 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 CALML6Q8TD86 181 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 DLG3Q92796 817 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 GORASP1Q9BQQ3 440 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 SPC25Q9HBM1 224 aa4.66□□□□□ -1.66
ECHDC1-213ENST00000474240 A0A087X0B3 334 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 SCDO00767 359 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 FOXP2O15409 715 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 ZEB2O60315 1214 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 DNAJC6O75061 913 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 FBXO21O94952 628 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 PTGS1P23219 599 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 RPL13P26373 211 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 AOAHP28039 575 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 MASP1P48740 699 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 DSG1Q02413 1049 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 ADCY1Q08828 1119 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 SMN1Q16637 294 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 SKIDA1Q1XH10 827 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 FAM26FQ5R3K3 315 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 PKN3Q6P5Z2 889 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 DDX46Q7L014 1031 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 CXXC5Q7LFL8 322 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 THNSL2Q86YJ6 484 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 WDR48Q8TAF3 677 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 CD248Q9HCU0 757 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 FBXO10Q9UK96 956 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 APOBEC2Q9Y235 224 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 TELO2Q9Y4R8 837 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 SPO11Q9Y5K1 396 aa4.65□□□□□ -1.67
ECHDC1-213ENST00000474240 MROH6A6NGR9 719 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 FAM90A27PA6NNH2 459 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 ACOT7O00154 380 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 TRAF5O00463 557 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 LAMTOR5O43504 91 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 BRINP1O60477 761 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 MAFO75444 373 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 LTFP02788 710 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 ZBTB48P10074 688 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 LSSP48449 732 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 KPNA1P52294 538 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 KIF11P52732 1056 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 KIAA2012Q0VF49 1180 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 FAPQ12884 760 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 EPHA7Q15375 998 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 SPDYAQ5MJ70 313 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 GPR158Q5T848 1215 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 RNF180Q86T96 592 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 FAM124AQ86V42 546 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 FAM26EQ8N5C1 309 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 KIAA1958Q8N8K9 716 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 ZCRB1Q8TBF4 217 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 USP7Q93009 1102 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 PPP4R1LQ9P1A2 415 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 USP36Q9P275 1121 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 ARHGAP20Q9P2F6 1191 aa4.64□□□□□ -1.67
ECHDC1-213ENST00000474240 C9orf118A6NHY6 69 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 CUTAO60888 179 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 ULK1O75385 1050 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 NCLP19338 710 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 INHBEP58166 350 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 TGFB2P61812 414 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 PFKPQ01813 784 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 MAP3K12Q12852 859 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 ADAM9Q13443 819 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 TMEM132BQ14DG7 1078 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 SMAD2Q15796 467 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 MCTP2Q6DN12 878 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 ZNF575Q86XF7 245 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 PROSER1Q86XN7 944 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 HIPK4Q8NE63 616 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 LEO1Q8WVC0 666 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 TTC1Q99614 292 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 FOXB1Q99853 325 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 SYT3Q9BQG1 590 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 BTBD2Q9BX70 525 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 ZNF341Q9BYN7 854 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 MTFR1LQ9H019 292 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 IFT22Q9H7X7 185 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 L2HGDHQ9H9P8 463 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms