RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 PCYT2Q99447 389 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 KIF2CQ99661 725 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 UPF2Q9HAU5 1272 aaKnown RBP14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 KCNJ14Q9UNX9 436 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 COL4A4P53420 1690 aaPredicted RBP14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 CYP3A7-CYP3A51PA0A087WV96 503 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 CCDC194A0A1B0GVG4 234 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 MBLAC1A4D2B0 266 aaPredicted RBP14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 RRN3P2A6NIE6 340 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 EDIL3O43854 480 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 FDPSP14324 419 aaKnown RBP14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 CYP3A7P24462 503 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 NHLH1Q02575 133 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 GPM6BQ13491 265 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 GRIK4Q16099 956 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 Q4G0T1 1027 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 TCEAL5Q5H9L2 206 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 ABHD15Q6UXT9 468 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 ZSCAN31Q96LW9 406 aaPredicted RBP14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 YME1L1Q96TA2 773 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 RIT2Q99578 217 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 BRMS1Q9HCU9 246 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 TUBE1Q9UJT0 475 aa14.66□□□□□ -0.06
SHROOM3-204ENST00000473602 SIP14410 1827 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 H3BNC9 293 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 BACH1O14867 736 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 ZP2Q05996 745 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 TIGD5Q53EQ6 642 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 PLEKHG4Q58EX7 1191 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 TOP1MTQ969P6 601 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 PABPC5Q96DU9 382 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 FBXL18Q96ME1 805 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 MBOAT7Q96N66 472 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 SAMD11Q96NU1 681 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 SH2B1Q9NRF2 756 aaPredicted RBP14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 TRPC6Q9Y210 931 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 MICAL3Q7RTP6 2002 aa14.65□□□□□ -0.06
SHROOM3-204ENST00000473602 COL1A2P08123 1366 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 MSH4O15457 936 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 HBP1O60381 514 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 UPP2O95045 317 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 PSAPP07602 524 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 INSRRP14616 1297 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 GCFC2P16383 781 aaKnown RBP14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 SFNP31947 248 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 PLCB4Q15147 1175 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 RABEP1Q15276 862 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 FAM26DQ5JW98 314 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 NEK8Q86SG6 692 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 RSPH3Q86UC2 560 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 CCDC60Q8IWA6 550 aaPredicted RBP14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 TMEM192Q8IY95 271 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 SEPT8Q92599 483 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 SLC5A5Q92911 643 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 ZNF302Q9NR11 478 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 FAM50BQ9Y247 325 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 PCDHA10Q9Y5I2 948 aa14.64□□□□□ -0.07
SHROOM3-204ENST00000473602 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 WDR64B1ANS9 1081 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 GAS7O60861 476 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 TDP2O95551 362 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 KRT2P35908 639 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 JAK3P52333 1124 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 ST3GAL1Q11201 340 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 TRIM29Q14134 588 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 COL19A1Q14993 1142 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 INF2Q27J81 1249 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 MARCH8Q5T0T0 291 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 LRCH2Q5VUJ6 765 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 PPP4R3AQ6IN85 833 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 PDXDC2PQ6P474 469 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 RDM1Q8NG50 284 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 ATP8B4Q8TF62 1192 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 TEKT3Q9BXF9 490 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 OSBPL7Q9BZF2 842 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 NSUN3Q9H649 340 aaKnown RBP14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 GJB4Q9NTQ9 266 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 CLDND1Q9NY35 253 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 PRKAG3Q9UGI9 489 aa14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 MAFBQ9Y5Q3 323 aaPredicted RBP14.63□□□□□ -0.07
SHROOM3-204ENST00000473602 TRIOO75962 3097 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 ST18O60284 1047 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 JAK2O60674 1132 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 PSMD10O75832 226 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 MMP1P03956 469 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 HMGN5P82970 282 aaKnown RBP14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 SWSAP1Q6NVH7 229 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 ADHFE1Q8IWW8 467 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 FAM167AQ96KS9 214 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 KCNH6Q9H252 994 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 DDX25Q9UHL0 483 aaKnown RBP14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 SAMM50Q9Y512 469 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 MYO7AQ13402 2215 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 IGSF9BQ9UPX0 1349 aa14.62□□□□□ -0.07
SHROOM3-204ENST00000473602 SMIM35A0A1B0GVV1 85 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms