RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CYP39A1Q9NYL5 469 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 ISY1Q9ULR0 285 aaKnown RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 CTDP1Q9Y5B0 961 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 FRMPD2Q68DX3 1309 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 DCHS1Q96JQ0 3298 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 RBM47A0AV96 593 aaKnown RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 GJB5O95377 273 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 BAG4O95429 457 aaKnown RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 PARP1P09874 1014 aaKnown RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 BMP3P12645 472 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 NOVP48745 357 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 AKAP17AQ02040 695 aaKnown RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 TRIM29Q14134 588 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 TKFCQ3LXA3 575 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 CRTC2Q53ET0 693 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 MUM1L1Q5H9M0 696 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 TMEM164Q5U3C3 297 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 MCTP1Q6DN14 999 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 NFRKBQ6P4R8 1299 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 TRAF7Q6Q0C0 670 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 WASF1Q92558 559 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 CHAMP1Q96JM3 812 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 TRERF1Q96PN7 1200 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 MAP3K14Q99558 947 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 RAD9AQ99638 391 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 C1QTNF2Q9BXJ5 285 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 RNF26Q9BY78 433 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 WDR11Q9BZH6 1224 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 CLIP2Q9UDT6 1046 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 MAD2L2Q9UI95 211 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 SYNPO2Q9UMS6 1093 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 NOVA2Q9UNW9 492 aaKnown RBP7.28□□□□□ -1.24
HDAC1-205ENST00000472928 SIP14410 1827 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 SPTBN2O15020 2390 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 CEP250Q9BV73 2442 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 VPS13AQ96RL7 3174 aa7.28□□□□□ -1.24
HDAC1-205ENST00000472928 ZNF292O60281 2723 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 MYO15AQ9UKN7 3530 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 hCG_1642624A0A1W2PR95 340 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 TMEM232C9JQI7 657 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 GOLGA6L22H0YM25 854 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 NBNO60934 754 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 DEXIO95424 95 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 CXCL10P02778 98 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 GOLGA8HP0CJ92 632 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 PDHBP11177 359 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 ALAS1P13196 640 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 NCLP19338 710 aaKnown RBP7.27□□□□□ -1.25
HDAC1-205ENST00000472928 MCM4P33991 863 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 GNAQP50148 359 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 CPT1AP50416 773 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 SNAP25P60880 206 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 PTPN11Q06124 597 aaPredicted RBP7.27□□□□□ -1.25
HDAC1-205ENST00000472928 RBL2Q08999 1139 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 RESTQ13127 1097 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 BFSP2Q13515 415 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 AGERQ15109 404 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 ASPRV1Q53RT3 343 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 SLFN13Q68D06 897 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 SRBD1Q8N5C6 995 aaKnown RBP7.27□□□□□ -1.25
HDAC1-205ENST00000472928 OR6J1Q8NGC5 347 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 PIBF1Q8WXW3 757 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 COPS5Q92905 334 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 MRPL38Q96DV4 380 aaKnown RBP7.27□□□□□ -1.25
HDAC1-205ENST00000472928 C17orf80Q9BSJ5 609 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 ALG13Q9NP73 1137 aaKnown RBP7.27□□□□□ -1.25
HDAC1-205ENST00000472928 ATP6V1DQ9Y5K8 247 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 ACACBO00763 2458 aa7.27□□□□□ -1.25
HDAC1-205ENST00000472928 ABHD14A-ACY1A0A1B0GW23 586 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 KLRF2D3W0D1 207 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 PRPF3O43395 683 aaKnown RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 SCG2P13521 617 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 SELPP16109 830 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 IRS1P35568 1242 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 ALDH5A1P51649 535 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 SH3BP2P78314 561 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 ZNF543Q08ER8 600 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 TCF15Q12870 199 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 PTK7Q13308 1070 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 GNL2Q13823 731 aaKnown RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 MBTPS1Q14703 1052 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 PTGISQ16647 500 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 EML3Q32P44 896 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 HERC4Q5GLZ8 1057 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 TCEAL5Q5H9L2 206 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 GDF6Q6KF10 455 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 FAM117BQ6P1L5 589 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 CNKSR3Q6P9H4 555 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 NSMFQ6X4W1 530 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 CLEC17AQ6ZS10 378 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 LRRC8DQ7L1W4 858 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 ADHFE1Q8IWW8 467 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms