RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SEPT8Q92599 483 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 CRAMP1Q96RY5 1269 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 TSSK1BQ9BXA7 367 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 TRIM45Q9H8W5 580 aaPredicted RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 RNASEH1O60930 286 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 ALCAMQ13740 583 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 TKFCQ3LXA3 575 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 CYFIP1Q7L576 1253 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 ERICH1Q86X53 443 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 IFT20Q8IY31 132 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PIGOQ8TEQ8 1089 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 STAG1Q8WVM7 1258 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SENP6Q9GZR1 1112 aaPredicted RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 DEFB129Q9H1M3 183 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 ZBTB40Q9NUA8 1239 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 GPC4O75487 556 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SUPT20HL2P0C7V6 817 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 IFNA8P32881 189 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 VCPP55072 806 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 LRRC41Q15345 812 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 TAF11Q15544 211 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PHKG1Q16816 387 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PPP1R2P3Q6NXS1 205 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 MB21D1Q8N884 522 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 UCMAQ8WVF2 138 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 DHX38Q92620 1227 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 SKA1Q96BD8 255 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 IFIH1Q9BYX4 1025 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 PLEKHA4Q9H4M7 779 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 AKAP7Q9P0M2 348 aaPredicted RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 SENP1Q9P0U3 644 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 ATP7BP35670 1465 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 RGL2O15211 777 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 AFPP02771 609 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 URODP06132 367 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SFNP31947 248 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PPARDQ03181 441 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 KYAT1Q16773 422 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 MGARPQ8TDB4 240 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SMARCAD1Q9H4L7 1026 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 HADHAP40939 763 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 STX1BP61266 288 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 CCDC170Q8IYT3 715 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 CFAP36Q96G28 342 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SIK2Q9H0K1 926 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 RAB17Q9H0T7 212 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 TLK1Q9UKI8 766 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 FAN1Q9Y2M0 1017 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 ZBTB5O15062 677 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PLA2G4BP0C869 781 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 BRD3Q15059 726 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 PRR23CQ6ZRP0 262 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 ZSCAN30Q86W11 494 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SDCCAG3Q96C92 435 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 TRPV6Q9H1D0 765 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 VCXQ9H320 206 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 HMX1Q9NP08 348 aaPredicted RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 NGRNQ9NPE2 291 aaKnown RBP9.23□□□□□ -0.93
CD47-204ENST00000471694 PCDHB9Q9Y5E1 797 aa9.23□□□□□ -0.93
CD47-204ENST00000471694 SGSM2O43147 1006 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 SYF2O95926 243 aaKnown RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 CYP2D6P10635 497 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 CYP19A1P11511 503 aaPredicted RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 KPNA2P52292 529 aaKnown RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 AP3B2Q13367 1082 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 NAA25Q14CX7 972 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 SHCBP1Q8NEM2 672 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 MORC4Q8TE76 937 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 SCFD1Q8WVM8 642 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 ABCC4O15439 1325 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 PTPRTO14522 1441 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 LCP1P13796 627 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 ARHGEF7Q14155 803 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 ZNF235Q14590 738 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 KLC3Q6P597 504 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 ARHGEF2Q92974 986 aaKnown RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 OPTNQ96CV9 577 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 UTYO14607 1347 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 A2ML1A8K2U0 1454 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 DFFAO00273 331 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 CASQ2O14958 399 aaPredicted RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 BUB1O43683 1085 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 FKTNO75072 461 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 ALDH1A2O94788 518 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 DDNO94850 711 aaPredicted RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 PSMA2P25787 234 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 LINC00116Q8NCU8 138 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 TBC1D16Q8TBP0 767 aa9.22□□□□□ -0.93
CD47-204ENST00000471694 ZNF274Q96GC6 653 aaPredicted RBP9.22□□□□□ -0.93
CD47-204ENST00000471694 CENPKQ9BS16 269 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms