RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 MSL2Q9HCI7 577 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 UCKL1Q9NWZ5 548 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 TRAF5O00463 557 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 DVL2O14641 736 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 ZNF623O75123 536 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 RFPL3O75679 317 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 GLRX3O76003 335 aaKnown RBP4.78□□□□□ -1.64
COPS3-206ENST00000471414 IGFALSP35858 605 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 FNTBP49356 437 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 IRF9Q00978 393 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 CD83Q01151 205 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 BMS1Q14692 1282 aaKnown RBP4.78□□□□□ -1.64
COPS3-206ENST00000471414 WDR72Q3MJ13 1102 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 ZMAT1Q5H9K5 638 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 SH3TC2Q8TF17 1288 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 GBP4Q96PP9 640 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 CDK5RAP1Q96SZ6 601 aaKnown RBP4.78□□□□□ -1.64
COPS3-206ENST00000471414 BOCQ9BWV1 1114 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 SEMA4AQ9H3S1 761 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 JADE2Q9NQC1 790 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 OAZ3Q9UMX2 235 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 TESMINQ9Y4I5 508 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 SLC30A1Q9Y6M5 507 aa4.78□□□□□ -1.64
COPS3-206ENST00000471414 A0A0G2JNJ9 132 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 B4E1Z4 1266 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 RAD17O75943 681 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 HMGCRP04035 888 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 ASLP04424 464 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 HGFACQ04756 655 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 MOGSQ13724 837 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 AGBL4Q5VU57 503 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 CREB3L3Q68CJ9 461 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 Q6ZSN1 163 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 TAX1BP1Q86VP1 789 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 C2orf69Q8N8R5 385 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 CHST14Q8NCH0 376 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 FOXB1Q99853 325 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 ORAI3Q9BRQ5 295 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 Q9UFV3 132 aa4.77□□□□□ -1.65
COPS3-206ENST00000471414 ZFR2Q9UPR6 939 aaKnown RBP4.77□□□□□ -1.65
COPS3-206ENST00000471414 PMS2P1A4D2B8 440 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 FAM83GA6ND36 823 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 ARHGAP6O43182 974 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 ADCY8P40145 1251 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 KCNQ1P51787 676 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 RAC3P60763 192 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 ALDH6A1Q02252 535 aaKnown RBP4.76□□□□□ -1.65
COPS3-206ENST00000471414 ZNF460Q14592 562 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 ZNF585AQ6P3V2 769 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 FUKQ8N0W3 1084 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 UBXN4Q92575 508 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 EDAQ92838 391 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 KIAA1683Q9H0B3 1180 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 SAMD15Q9P1V8 674 aa4.76□□□□□ -1.65
COPS3-206ENST00000471414 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
COPS3-206ENST00000471414 PRAMEF22A3QJZ6 481 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 M0R2C6 588 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 PPP1R12AO14974 1030 aaPredicted RBP4.75□□□□□ -1.65
COPS3-206ENST00000471414 HIP1RO75146 1068 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 PRLP01236 227 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 CR2P20023 1033 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 SDSP20132 328 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 RRADP55042 308 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 TMEM132BQ14DG7 1078 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 PCOLCEQ15113 449 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 CCDC144BQ3MJ40 725 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 GRAMD4Q6IC98 578 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 CRIP3Q6Q6R5 217 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 USP30Q70CQ3 517 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 DDX53Q86TM3 631 aaKnown RBP4.75□□□□□ -1.65
COPS3-206ENST00000471414 Q8N1X5 172 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 C16orf92Q96LL3 132 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 DRC1Q96MC2 740 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 LRRC37BQ96QE4 947 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 DPYSL5Q9BPU6 564 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 HAPLN2Q9GZV7 340 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 OR10A2Q9H208 303 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 PIF1Q9H611 641 aa4.75□□□□□ -1.65
COPS3-206ENST00000471414 CBX4O00257 560 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 MUSKO15146 869 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 APPP05067 770 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 APEX1P27695 318 aaKnown RBP4.74□□□□□ -1.65
COPS3-206ENST00000471414 MRE11P49959 708 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 ZXDAP98168 799 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 NOLC1Q14978 699 aaKnown RBP eCLIP4.74□□□□□ -1.65
COPS3-206ENST00000471414 ZNF568Q3ZCX4 644 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 SYNPOQ8N3V7 929 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 HIPK4Q8NE63 616 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 SH3RF3Q8TEJ3 882 aaPredicted RBP4.74□□□□□ -1.65
COPS3-206ENST00000471414 MRFAP1L1Q96HT8 127 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 RNPC3Q96LT9 517 aaKnown RBP4.74□□□□□ -1.65
COPS3-206ENST00000471414 TMPRSS5Q9H3S3 457 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 DEF6Q9H4E7 631 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 ZSWIM4Q9H7M6 989 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 INTS7Q9NVH2 962 aaKnown RBP4.74□□□□□ -1.65
COPS3-206ENST00000471414 B4GALT6Q9UBX8 382 aa4.74□□□□□ -1.65
COPS3-206ENST00000471414 CDC42EP3Q9UKI2 254 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms