RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 GPR85P60893 370 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 SUMO1P63165 101 aaKnown RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 HNRNPA0Q13151 305 aaKnown RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 EFCAB2Q5VUJ9 269 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 RSPO2Q6UXX9 243 aaPredicted RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 RNF207Q6ZRF8 634 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 CLEC4DQ8WXI8 215 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 ZCCHC14Q8WYQ9 949 aaKnown RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 SEC14L1Q92503 715 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 NINJ1Q92982 152 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 ZNF503Q96F45 646 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 ZSWIM3Q96MP5 696 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 CEP89Q96ST8 783 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 IKZF4Q9H2S9 585 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 NGRNQ9NPE2 291 aaKnown RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 MARCH2Q9P0N8 246 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 RBPJLQ9UBG7 517 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 COQ6Q9Y2Z9 468 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 ADGRL1O94910 1474 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 FMN1Q68DA7 1419 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 RASSF10A6NK89 507 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 ZNF561-AS1K7EIQ3 104 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 KCNK3O14649 394 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 B4GALT4O60513 344 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 ZNF202O95125 648 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 EYA4O95677 639 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 PYGMP11217 842 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 POU3F2P20265 443 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 HSD3B2P26439 372 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 SLC6A11P48066 632 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 JAM2P57087 298 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 NANOS3P60323 173 aaKnown RBP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 GABREP78334 506 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 NKX3-2P78367 333 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 AMPD3Q01432 767 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 DPTQ07507 201 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 PRKD1Q15139 912 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 CEP68Q76N32 757 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 KLHL36Q8N4N3 616 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 PDGFDQ9GZP0 370 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 NDOR1Q9UHB4 597 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 TIMM13Q9Y5L4 95 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 TNFRSF18Q9Y5U5 241 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 PPRC1Q5VV67 1664 aaKnown RBP3.8□□□□□ -1.8
UBXN4-206ENST00000470687 ABCA9Q8IUA7 1624 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 EFCAB5A4FU69 1503 aa3.8□□□□□ -1.8
UBXN4-206ENST00000470687 ARID4BQ4LE39 1312 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 FAM90A27PA6NNH2 459 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 ZNF891A8MT65 544 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 C22orf46C9J442 243 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 MAN2B1O00754 1011 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 NARSO43776 548 aaKnown RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 CDC45O75419 566 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 SOD2P04179 222 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 VIL1P09327 827 aaKnown RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 NAT2P11245 290 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 ID4P47928 161 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 LSAMPQ13449 338 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 HS1BP3Q53T59 392 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 MAMDC2Q7Z304 686 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 MILR1Q7Z6M3 343 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 NOSTRINQ8IVI9 506 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 RPUSD2Q8IZ73 545 aaKnown RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 ARRDC4Q8NCT1 418 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 PIP4K2CQ8TBX8 421 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 FBXO41Q8TF61 875 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 APPBP2Q92624 585 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 TRIM8Q9BZR9 551 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 MS4A5Q9H3V2 200 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 H2AFY2Q9P0M6 372 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 SETD1BQ9UPS6 1966 aaKnown RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 PCSK5Q92824 1860 aa3.79□□□□□ -1.8
UBXN4-206ENST00000470687 DENND4BO75064 1496 aaPredicted RBP3.79□□□□□ -1.8
UBXN4-206ENST00000470687 FHOD3Q2V2M9 1422 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 TCRBV5S2A0A599 114 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 FOXS1O43638 330 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 CNOT4O95628 575 aaKnown RBP3.78□□□□□ -1.8
UBXN4-206ENST00000470687 LACTBP83111 547 aaPredicted RBP3.78□□□□□ -1.8
UBXN4-206ENST00000470687 DSG1Q02413 1049 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 NFATC3Q12968 1075 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 KCNAB2Q13303 367 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 NRN1LQ496H8 165 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 ZC3H12BQ5HYM0 836 aaKnown RBP3.78□□□□□ -1.8
UBXN4-206ENST00000470687 EMC4Q5J8M3 183 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 OTOP1Q7RTM1 612 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 OTOP3Q7RTS5 596 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 OSTM1Q86WC4 334 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 HOMER1Q86YM7 354 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 RIOX2Q8IUF8 465 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 UBR7Q8N806 425 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBXN4-206ENST00000470687 CLIC6Q96NY7 704 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 FEZ1Q99689 392 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 CDC6Q99741 560 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 ORAI3Q9BRQ5 295 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 FTSJ1Q9UET6 329 aa3.78□□□□□ -1.8
UBXN4-206ENST00000470687 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBXN4-206ENST00000470687 ZFR2Q9UPR6 939 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms