RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 CRIPAKQ8N1N5 446 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 PPP2R3CQ969Q6 453 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 C1orf112Q9NSG2 853 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 PADI3Q9ULW8 664 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 MAFBQ9Y5Q3 323 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-204ENST00000469504 RALGAPA2Q2PPJ7 1873 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 WDR64B1ANS9 1081 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 GPR182O15218 404 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 MAGEB2O15479 319 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 MMP1P03956 469 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 LINC00271P0C7V0 271 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 KCNA5P22460 613 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 SWSAP1Q6NVH7 229 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
COL4A3-204ENST00000469504 RUFY3Q7L099 469 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 NECAB3Q96P71 396 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-204ENST00000469504 TM6SF1Q9BZW5 370 aa12.43□□□□□ -0.42
COL4A3-204ENST00000469504 TTC3P53804 2025 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 DDX39AO00148 427 aaKnown RBP12.42□□□□□ -0.42
COL4A3-204ENST00000469504 RPS6KA5O75582 802 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 CPA1P15085 419 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 COL9A1P20849 921 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 TMOD1P28289 359 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 PDIA3P30101 505 aaKnown RBP12.42□□□□□ -0.42
COL4A3-204ENST00000469504 SFNP31947 248 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 SARSP49591 514 aaKnown RBP12.42□□□□□ -0.42
COL4A3-204ENST00000469504 CRYBB1P53674 252 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-204ENST00000469504 PRR16Q569H4 304 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 TCEAL5Q5H9L2 206 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 CKAP2LQ8IYA6 745 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 KIAA0319LQ8IZA0 1049 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 RDM1Q8NG50 284 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 TRAPPC12Q8WVT3 735 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 LINC01599Q8WXQ3 324 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 PHKBQ93100 1093 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 ZNF274Q96GC6 653 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-204ENST00000469504 RIT2Q99578 217 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 PRKAG3Q9UGI9 489 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 LRFN2Q9ULH4 789 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 BRWD1Q9NSI6 2320 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 REV3LO60673 3130 aa12.42□□□□□ -0.42
COL4A3-204ENST00000469504 GRXCR2A6NFK2 248 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 CPLX1O14810 134 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 DEXIO95424 95 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 C22orf31O95567 290 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 JAK3P52333 1124 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 CDC42EP1Q00587 391 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 TMEM62Q0P6H9 643 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 CSPP1Q1MSJ5 1256 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 PTCRAQ6ISU1 281 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-204ENST00000469504 MOXD1Q6UVY6 613 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-204ENST00000469504 FAM178BQ8IXR5 827 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-204ENST00000469504 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 ELAC1Q9H777 363 aaKnown RBP12.41□□□□□ -0.42
COL4A3-204ENST00000469504 ERVK-5Q9HDB9 667 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 RGS18Q9NS28 235 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 NRBP2Q9NSY0 501 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 ARIH1Q9Y4X5 557 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-204ENST00000469504 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 CYP46A1Q9Y6A2 500 aa12.41□□□□□ -0.42
COL4A3-204ENST00000469504 DENND3A2RUS2 1198 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 ZBTB42B2RXF5 422 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 HOXA2O43364 376 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 ATP4AP20648 1035 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 NLRP5P59047 1200 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 UBE3AQ05086 875 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 SSRP1Q08945 709 aaKnown RBP12.4□□□□□ -0.42
COL4A3-204ENST00000469504 NFX1Q12986 1120 aaKnown RBP12.4□□□□□ -0.42
COL4A3-204ENST00000469504 CTC1Q2NKJ3 1217 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 Q4G0T1 1027 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 SLC24A5Q71RS6 500 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 DAGLBQ8NCG7 672 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 RSPH1Q8WYR4 309 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 LENG9Q96B70 501 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 PCDHA4Q9UN74 947 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 PLAGL2Q9UPG8 496 aa12.4□□□□□ -0.42
COL4A3-204ENST00000469504 CYP3A7-CYP3A51PA0A087WV96 503 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 PI4K2BG5E9Z4 385 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 GRM6O15303 877 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 GAS7O60861 476 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 GPR37L1O60883 481 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 CDKL5O76039 1030 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 CYP3A7P24462 503 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms