RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 ITGB3P05106 788 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 KCNQ1P51787 676 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 PPP2CBP62714 309 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 PPP2CAP67775 309 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 CD83Q01151 205 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 PLEKHH3Q7Z736 793 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 RALYLQ86SE5 291 aaKnown RBP5.65□□□□□ -1.5
GPNMB-207ENST00000468723 SYNPOQ8N3V7 929 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 AJUBAQ96IF1 538 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 RBM15Q96T37 977 aaKnown RBP eCLIP5.65□□□□□ -1.5
GPNMB-207ENST00000468723 PPP4R1LQ9P1A2 415 aa5.65□□□□□ -1.5
GPNMB-207ENST00000468723 MAGEC2Q9UBF1 373 aaPredicted RBP5.65□□□□□ -1.5
GPNMB-207ENST00000468723 NPEPPSL1A6NEC2 478 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 GOLGA6L22H0YM25 854 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 H7C1D1 291 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 CBX4O00257 560 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 POLD1P28340 1107 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 SDHAP31040 664 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 TOP3AQ13472 1001 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-207ENST00000468723 USP10Q14694 798 aaKnown RBP5.64□□□□□ -1.51
GPNMB-207ENST00000468723 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.51
GPNMB-207ENST00000468723 CC2D1AQ6P1N0 951 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-207ENST00000468723 GLB1LQ6UWU2 654 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 OTOP2Q7RTS6 562 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 NXPE1Q8N323 547 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 NINJ1Q92982 152 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 BTBD2Q9BX70 525 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 KATNBL1Q9H079 304 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 PCIF1Q9H4Z3 704 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 B4GALT6Q9UBX8 382 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 ASB1Q9Y576 335 aa5.64□□□□□ -1.51
GPNMB-207ENST00000468723 SLC9A1P19634 815 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 MOGSQ13724 837 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 STILQ15468 1287 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 SURF1Q15526 300 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 ZNF174Q15697 407 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 LRRTM3Q86VH5 581 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 REXO1L1PQ8IX06 675 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 NIM1KQ8IY84 436 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 KIAA1958Q8N8K9 716 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 LOXL4Q96JB6 756 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 CARD11Q9BXL7 1154 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 OR10A5Q9H207 317 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 INTS7Q9NVH2 962 aaKnown RBP5.63□□□□□ -1.51
GPNMB-207ENST00000468723 H2AFY2Q9P0M6 372 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-207ENST00000468723 MAGEL2Q9UJ55 1249 aa5.63□□□□□ -1.51
GPNMB-207ENST00000468723 FAM83GA6ND36 823 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 PTX3P26022 381 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-207ENST00000468723 PCBP1Q15365 356 aaKnown RBP eCLIP5.62□□□□□ -1.51
GPNMB-207ENST00000468723 KANK2Q63ZY3 851 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 SDE2Q6IQ49 451 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 LARP4Q71RC2 724 aaKnown RBP eCLIP5.62□□□□□ -1.51
GPNMB-207ENST00000468723 RTN4RL1Q86UN2 441 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-207ENST00000468723 FOXRED1Q96CU9 486 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-207ENST00000468723 LRRC37BQ96QE4 947 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 SSBP3Q9BWW4 388 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-207ENST00000468723 ZDHHC5Q9C0B5 715 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 MTFR1LQ9H019 292 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 KIAA1683Q9H0B3 1180 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 IFT57Q9NWB7 429 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 ZKSCAN5Q9Y2L8 839 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
GPNMB-207ENST00000468723 ZNF891A8MT65 544 aaPredicted RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 CUTAO60888 179 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 CNOT4O95628 575 aaKnown RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 HMGCRP04035 888 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ATP2A2P16615 1042 aaKnown RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ETV4P43268 484 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 EPHB4P54760 987 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 SLC6A3Q01959 620 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ALDH6A1Q02252 535 aaKnown RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 DALRD3Q5D0E6 543 aaKnown RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 CXXC5Q7LFL8 322 aaKnown RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ANKRD13AQ8IZ07 590 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 IFNL2Q8IZJ0 200 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 CALML6Q8TD86 181 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 GNRHR2Q96P88 292 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ELF4Q99607 663 aaPredicted RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 FEZ1Q99689 392 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 TARS2Q9BW92 718 aaKnown RBP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ACSS2Q9NR19 701 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 OXSMQ9NWU1 459 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 ST6GALNAC2Q9UJ37 374 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
GPNMB-207ENST00000468723 SBNO2Q9Y2G9 1366 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 SLC4A7Q9Y6M7 1214 aa5.61□□□□□ -1.51
GPNMB-207ENST00000468723 A0A0G2JNJ9 132 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 GPR42O15529 346 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 GAS7O60861 476 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 FNTBP49356 437 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 RGS3P49796 1198 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 STAT5BP51692 787 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 EFEMP1Q12805 493 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 TBR1Q16650 682 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 ZNF827Q17R98 1081 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 RNF151Q2KHN1 245 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 ZNF568Q3ZCX4 644 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 GRAMD4Q6IC98 578 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 FILIP1Q7Z7B0 1213 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms