RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 IFNL2Q8IZJ0 200 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 ANKRD42Q8N9B4 389 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 MYRIPQ8NFW9 859 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 SH3RF2Q8TEC5 729 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 TUBGCP5Q96RT8 1024 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 GTPBP4Q9BZE4 634 aaKnown RBP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 DDX21Q9NR30 783 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 TNFRSF10DQ9UBN6 386 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 PCDHGB6Q9Y5F9 930 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 B3GALT1Q9Y5Z6 326 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 CECR2Q9BXF3 1484 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 TMEM265A0A087WTH1 108 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 ST20-MTHFSA0A0A6YYL1 179 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 F5H423 210 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 TPP1O14773 563 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 GSC2O15499 205 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 BUB1BO60566 1050 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 PPP1R11O60927 126 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 DTNBO60941 627 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 F13BP05160 661 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 PTPN1P18031 435 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 PDCP20941 246 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 HTR3AP46098 478 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 SLC5A3P53794 718 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 SLC16A1P53985 500 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 USP14P54578 494 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 CCT2P78371 535 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 CDK17Q00537 523 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 INO80DQ53TQ3 878 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 ATAT1Q5SQI0 421 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 FAM83BQ5T0W9 1011 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 DARS2Q6PI48 645 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 KCTD1Q719H9 257 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 CXorf67Q86X51 503 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 FAM156AQ8NDB6 213 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 HIPK4Q8NE63 616 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 PPP1R35Q8TAP8 253 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 PLEKHO2Q8TD55 490 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 PNISRQ8TF01 805 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 DIS3LQ8TF46 1054 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 SSH1Q8WYL5 1049 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 DLG3Q92796 817 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 HPS3Q969F9 1004 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 GJA10Q969M2 543 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 SCLT1Q96NL6 688 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 FAM193BQ96PV7 902 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 JMJD8Q96S16 334 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 METTL22Q9BUU2 404 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 POFUT1Q9H488 388 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 GNL3LQ9NVN8 582 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 USP36Q9P275 1121 aaKnown RBP4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 U3KQE9 123 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 X6R8D5 127 aa4.61□□□□□ -1.67
HMGB1P25-201ENST00000468402 HGSO14964 777 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 TBX3O15119 743 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CYP26A1O43174 497 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 ESR1P03372 595 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 NTRK1P04629 796 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 SETSIPP0DME0 302 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 GJA4P35212 333 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 BCAR1P56945 870 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 RTP1P59025 263 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZNF280AP59817 542 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 TUSC3Q13454 348 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 GALEQ14376 348 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 EPHA7Q15375 998 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 SEC23AQ15436 765 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CHRNA2Q15822 529 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 RNF43Q68DV7 783 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CEP128Q6ZU80 1094 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 USP45Q70EL2 814 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CHST15Q7LFX5 561 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CABP7Q86V35 215 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 TICAM2Q86XR7 235 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZNF354CQ86Y25 554 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 PHYKPLQ8IUZ5 450 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 SMAP1Q8IYB5 467 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CPXCR1Q8N123 301 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 THEMISQ8N1K5 641 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 PLD6Q8N2A8 252 aaKnown RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 UHMK1Q8TAS1 419 aaKnown RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 NETO1Q8TDF5 533 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 AUTS2Q8WXX7 1259 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 C1GALT1C1Q96EU7 318 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 MVB12AQ96EY5 273 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 RAX2Q96IS3 184 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 CCDC138Q96M89 665 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 GBP4Q96PP9 640 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 TBCBQ99426 244 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 APOL5Q9BWW9 433 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 NAA15Q9BXJ9 866 aaKnown RBP4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 SEMA4AQ9H3S1 761 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 MKNK2Q9HBH9 465 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 SEMA3GQ9NS98 782 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 KLHL11Q9NVR0 708 aa4.6□□□□□ -1.67
HMGB1P25-201ENST00000468402 DPP7Q9UHL4 492 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms