RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 TAF2Q6P1X5 1199 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 B3GNT9Q6UX72 402 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 Q7L0L9 218 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 KRT25Q7Z3Z0 450 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
COL4A6-205ENST00000468338 DEFB123Q8N688 67 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 TNFRSF25Q93038 417 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 RIT2Q99578 217 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 AZI2Q9H6S1 392 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 RRN3P2A6NIE6 340 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 JAK2O60674 1132 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 PSMD10O75832 226 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 INSRRP14616 1297 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 ATP4AP20648 1035 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 MARK3P27448 753 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 THPOP40225 353 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 KRT76Q01546 638 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 GRIK4Q16099 956 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 LLPHQ9BRT6 129 aaKnown RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 PBX4Q9BYU1 374 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
COL4A6-205ENST00000468338 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 MAFBQ9Y5Q3 323 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-205ENST00000468338 GRXCR1A8MXD5 290 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
COL4A6-205ENST00000468338 SMAPO00193 183 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 BAIAP3O94812 1187 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 TDP2O95551 362 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 ACTN1P12814 892 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 RABEP1Q15276 862 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 INF2Q27J81 1249 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
COL4A6-205ENST00000468338 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 MIS18BP1Q6P0N0 1132 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 CNKSR3Q6P9H4 555 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 ETNPPLQ8TBG4 499 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 PHOSPHO2Q8TCD6 241 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 ATP8B4Q8TF62 1192 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
COL4A6-205ENST00000468338 TUBE1Q9UJT0 475 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 PCDHA10Q9Y5I2 948 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 SLC4A7Q9Y6M7 1214 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 GBF1Q92538 1859 aa12.61□□□□□ -0.39
COL4A6-205ENST00000468338 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 ZBTB42B2RXF5 422 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 HBP1O60381 514 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 MMP1P03956 469 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 RPLP2P05387 115 aaKnown RBP12.6□□□□□ -0.39
COL4A6-205ENST00000468338 PBX2P40425 430 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 TCTN1Q2MV58 587 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 PLEKHG4Q58EX7 1191 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 SWSAP1Q6NVH7 229 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 RUFY4Q6ZNE9 571 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 NEK8Q86SG6 692 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 RDM1Q8NG50 284 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 GUCD1Q96NT3 240 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 OSBPL7Q9BZF2 842 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 FTOQ9C0B1 505 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL4A6-205ENST00000468338 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 PCDHA2Q9Y5H9 948 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 EVPLQ92817 2033 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 PTPRSQ13332 1948 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 IGSF9BQ9UPX0 1349 aa12.6□□□□□ -0.39
COL4A6-205ENST00000468338 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 COL1A2P08123 1366 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 ABHD14A-ACY1A0A1B0GW23 586 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 WDR64B1ANS9 1081 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 BACH1O14867 736 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 SLC37A4O43826 429 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 GAS7O60861 476 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 CHRNA1P02708 482 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 PSAPP07602 524 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
COL4A6-205ENST00000468338 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
COL4A6-205ENST00000468338 ATP2A2P16615 1042 aaKnown RBP12.59□□□□□ -0.39
COL4A6-205ENST00000468338 SFNP31947 248 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 KRT2P35908 639 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 GCGRP47871 477 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 MGAT3Q09327 533 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 NR5A1Q13285 461 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 LRCH2Q5VUJ6 765 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 KRT40Q6A162 431 aa12.59□□□□□ -0.39
COL4A6-205ENST00000468338 PDXDC2PQ6P474 469 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms