RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CABP7Q86V35 215 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 SYTL5Q8TDW5 730 aaPredicted RBP13.65□□□□□ -0.22
VPS26A-204ENST00000467852 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 NELL1Q92832 810 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 PUS7LQ9H0K6 701 aaKnown RBP13.65□□□□□ -0.22
VPS26A-204ENST00000467852 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
VPS26A-204ENST00000467852 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 NR3C2P08235 984 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 PPM1AP35813 382 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 MAGEA9P43362 315 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 TDO2P48775 406 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 STARD6P59095 220 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 LPAL2Q16609 132 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 USH1GQ495M9 461 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 GPR149Q86SP6 731 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 ERC1Q8IUD2 1116 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 GLG1Q92896 1179 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 FAM126AQ9BYI3 521 aaPredicted RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 ZNF215Q9UL58 517 aaPredicted RBP13.64□□□□□ -0.23
VPS26A-204ENST00000467852 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
VPS26A-204ENST00000467852 C2orf16Q68DN1 1984 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 SLC3A2P08195 630 aaKnown RBP13.63□□□□□ -0.23
VPS26A-204ENST00000467852 TGFB3P10600 412 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-204ENST00000467852 PAK2Q13177 524 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 SOWAHCQ53LP3 525 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-204ENST00000467852 FAM102BQ5T8I3 360 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 PRR23BQ6ZRT6 265 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 CELF5Q8N6W0 485 aaKnown RBP13.63□□□□□ -0.23
VPS26A-204ENST00000467852 DNAJB3Q8WWF6 145 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 TBC1D5Q92609 795 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 CWH43Q9H720 699 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 SFXN1Q9H9B4 322 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 PADI3Q9ULW8 664 aa13.63□□□□□ -0.23
VPS26A-204ENST00000467852 KANSL1LA0AUZ9 987 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 CXCL14O95715 111 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 CHGBP05060 677 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
VPS26A-204ENST00000467852 EPCAMP16422 314 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 MRPS6P82932 125 aaKnown RBP13.62□□□□□ -0.23
VPS26A-204ENST00000467852 IER5Q5VY09 327 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 ZNF558Q96NG5 402 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 MYL10Q9BUA6 226 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 COL20A1Q9P218 1284 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 BPTFQ12830 3046 aa13.62□□□□□ -0.23
VPS26A-204ENST00000467852 FRMPD2Q68DX3 1309 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-204ENST00000467852 SMG1Q96Q15 3661 aaKnown RBP13.61□□□□□ -0.23
VPS26A-204ENST00000467852 TSPY2A6NKD2 308 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 EIF4E1BA6NMX2 242 aaKnown RBP13.61□□□□□ -0.23
VPS26A-204ENST00000467852 M0QZ92 97 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 APPP05067 770 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
VPS26A-204ENST00000467852 UBA1P22314 1058 aaKnown RBP13.61□□□□□ -0.23
VPS26A-204ENST00000467852 LIMK1P53667 647 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 SP2Q02086 613 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 STAMQ92783 540 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 PXMP2Q9NR77 195 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 SLC2A4RGQ9NR83 387 aa13.61□□□□□ -0.23
VPS26A-204ENST00000467852 ADAMTS20P59510 1910 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 TM4SF5O14894 197 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 KCNK5O95279 499 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
VPS26A-204ENST00000467852 PDE4AP27815 886 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 NRLP54845 237 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 AASDHQ4L235 1098 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-204ENST00000467852 TSSK4Q6SA08 328 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 FAM43BQ6ZT52 329 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-204ENST00000467852 ZCCHC14Q8WYQ9 949 aaKnown RBP13.6□□□□□ -0.23
VPS26A-204ENST00000467852 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 IL1RAPL2Q9NP60 686 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 EPS15L1Q9UBC2 864 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 DMXL2Q8TDJ6 3036 aa13.6□□□□□ -0.23
VPS26A-204ENST00000467852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.59□□□□□ -0.23
VPS26A-204ENST00000467852 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
VPS26A-204ENST00000467852 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
VPS26A-204ENST00000467852 GIT2Q14161 759 aa13.59□□□□□ -0.23
VPS26A-204ENST00000467852 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
VPS26A-204ENST00000467852 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
VPS26A-204ENST00000467852 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
VPS26A-204ENST00000467852 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms