RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FAM160B1Q5W0V3 765 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 FBXO46Q6PJ61 603 aaPredicted RBP7.65□□□□□ -1.18
SCAF4-204ENST00000467731 ANO5Q75V66 913 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 CKAP2LQ8IYA6 745 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 ERCC4Q92889 916 aaPredicted RBP7.65□□□□□ -1.18
SCAF4-204ENST00000467731 NACC1Q96RE7 527 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 C16orf70Q9BSU1 422 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 NUP62CLQ9H1M0 184 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 BHMT2Q9H2M3 363 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 CUEDC2Q9H467 287 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 KBTBD4Q9NVX7 518 aa7.65□□□□□ -1.18
SCAF4-204ENST00000467731 SCN10AQ9Y5Y9 1956 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 MSCO60682 206 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 DKC1O60832 514 aaKnown RBP eCLIP7.65□□□□□ -1.19
SCAF4-204ENST00000467731 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.19
SCAF4-204ENST00000467731 CASP1P29466 404 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 SLC12A3P55017 1021 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 BRDTQ58F21 947 aaPredicted RBP7.65□□□□□ -1.19
SCAF4-204ENST00000467731 PLPPR4Q7Z2D5 763 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 KCTD17Q8N5Z5 321 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 CEP120Q8N960 986 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 SMARCAD1Q9H4L7 1026 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 SPC25Q9HBM1 224 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 USP25Q9UHP3 1055 aa7.65□□□□□ -1.19
SCAF4-204ENST00000467731 STBD1O95210 358 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 EYA4O95677 639 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 OATP04181 439 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PLA2G4BP0C869 781 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PNOCQ13519 176 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PKN2Q16513 984 aaKnown RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 GNASQ5JWF2 1037 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PLA2G4FQ68DD2 849 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 LHX8Q68G74 356 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 SV2BQ7L1I2 683 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PAGE5Q96GU1 130 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 UPF3AQ9H1J1 476 aaKnown RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 TNMDQ9H2S6 317 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 CLSTN2Q9H4D0 955 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 ERAP1Q9NZ08 941 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 SEPT9Q9UHD8 586 aaPredicted RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 H3BRB1 525 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 RARRES1P49788 294 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 SLC26A2P50443 739 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 NPEPPSP55786 919 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PURAQ00577 322 aaKnown RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 POSTNQ15063 836 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 XKR3Q5GH77 459 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 CCDC183Q5T5S1 534 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 SH3RF1Q7Z6J0 888 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 SYT2Q8N9I0 419 aaPredicted RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 BLZF1Q9H2G9 400 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 RNPEPQ9H4A4 650 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 TUT1Q9H6E5 874 aaKnown RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 MAGEF1Q9HAY2 307 aa7.64□□□□□ -1.19
SCAF4-204ENST00000467731 PAK6Q9NQU5 681 aaPredicted RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 ZNF215Q9UL58 517 aaPredicted RBP7.64□□□□□ -1.19
SCAF4-204ENST00000467731 F2P00734 622 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 MYL3P08590 195 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CCL5P13501 91 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 NKX3-2P78367 333 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 MDM2Q00987 491 aaPredicted RBP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 RAD51AP2Q09MP3 1159 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 PLCB4Q15147 1175 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 XKR9Q5GH70 373 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 OTUD6AQ7L8S5 288 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 SYAP1Q96A49 352 aaPredicted RBP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CCDC34Q96HJ3 373 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 ZNF333Q96JL9 665 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CCDC43Q96MW1 224 aaKnown RBP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 TRIM9Q9C026 710 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 RNF208Q9H0X6 261 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 DBR1Q9UK59 544 aaKnown RBP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 ARHGEF35A5YM69 484 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 MYMKA6NI61 221 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 XRCC6P12956 609 aaKnown RBP eCLIP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CYP11B2P19099 503 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CHMP4BP1P59074 171 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CUL4BQ13620 913 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 KCNA10Q16322 511 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 MTERF2Q49AM1 385 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 ARSHQ5FYA8 562 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 RINT1Q6NUQ1 792 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 RNF180Q86T96 592 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 GPBP1Q86WP2 473 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 ELOA2Q8IYF1 753 aaPredicted RBP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 KLHDC9Q8NEP7 349 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 ATP8B4Q8TF62 1192 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 DDX12PQ92771 950 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 KAT2BQ92831 832 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CEP170P1Q96L14 293 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 DEFB118Q96PH6 123 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 RUSC1Q9BVN2 902 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 CYP26B1Q9NR63 512 aa7.63□□□□□ -1.19
SCAF4-204ENST00000467731 BMP2KQ9NSY1 1161 aaPredicted RBP7.63□□□□□ -1.19
SCAF4-204ENST00000467731 ANKEF1Q9NU02 776 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms