RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TBC1D22BQ9NU19 505 aa15.9■□□□□ 0.14
CCHCR1-211ENST00000467553 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-211ENST00000467553 TTC3P53804 2025 aa15.9■□□□□ 0.14
CCHCR1-211ENST00000467553 ENPP3O14638 875 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 ST18O60284 1047 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 GHRP10912 638 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 INSRRP14616 1297 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 COL9A1P20849 921 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 KRT2P35908 639 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 GPM6BQ13491 265 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 LPIN1Q14693 890 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 DNAJB3Q8WWF6 145 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 CLP1Q92989 425 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 PCYT2Q99447 389 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 BRMS1Q9HCU9 246 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 TCEAL9Q9UHQ7 104 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 FAM50BQ9Y247 325 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 CDY2AQ9Y6F7 541 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 KDM3AQ9Y4C1 1321 aa15.89■□□□□ 0.13
CCHCR1-211ENST00000467553 IGKV6D-21A0A0A0MT36 114 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 SMIM35A0A1B0GVV1 85 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 BACH1O14867 736 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 MSH4O15457 936 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 TDP2O95551 362 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 CCNE2O96020 404 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 IGBP1P78318 339 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 LETM2Q2VYF4 491 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 ODR4Q5SWX8 454 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 SWSAP1Q6NVH7 229 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 ABHD15Q6UXT9 468 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 PIK3AP1Q6ZUJ8 805 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 GJA10Q969M2 543 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 LENG9Q96B70 501 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 TBC1D32Q96NH3 1257 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 C11orf84Q9BUA3 381 aaPredicted RBP15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 PLVAPQ9BX97 442 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 OSBPL7Q9BZF2 842 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 NSUN3Q9H649 340 aaKnown RBP15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 TRPC6Q9Y210 931 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 SAMM50Q9Y512 469 aa15.88■□□□□ 0.13
CCHCR1-211ENST00000467553 COL1A2P08123 1366 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 CYP3A7-CYP3A51PA0A087WV96 503 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 POTEB3A0JP26 581 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 HBP1O60381 514 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 CYP3A7P24462 503 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 BMPR1AP36894 532 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 GUCY1B3Q02153 619 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 NR5A1Q13285 461 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 PLCB4Q15147 1175 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 Q4G0T1 1027 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 NAALADL2Q58DX5 795 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 FAM160B1Q5W0V3 765 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 MIS18BP1Q6P0N0 1132 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 POTEBQ6S5H4 581 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 ZNF689Q96CS4 500 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 NECAB3Q96P71 396 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 LLPHQ9BRT6 129 aaKnown RBP15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 BACH2Q9BYV9 841 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 RC3H2Q9HBD1 1191 aaKnown RBP15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 TRPV2Q9Y5S1 764 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 ADGRA3Q8IWK6 1321 aa15.87■□□□□ 0.13
CCHCR1-211ENST00000467553 BTBD18B2RXH4 712 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 GAS7O60861 476 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 MMP1P03956 469 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 STAG3L1P0CL83 205 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 KRT76Q01546 638 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 COL19A1Q14993 1142 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 EARS2Q5JPH6 523 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 ZNF746Q6NUN9 644 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 NEK8Q86SG6 692 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 ZNF710Q8N1W2 664 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 FAM184AQ8NB25 1140 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 NEK9Q8TD19 979 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 SLC5A5Q92911 643 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 TEKT3Q9BXF9 490 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 CELF4Q9BZC1 486 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 DDX25Q9UHL0 483 aaKnown RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 ARIH1Q9Y4X5 557 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 PCDHA10Q9Y5I2 948 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 IGSF9BQ9UPX0 1349 aa15.86■□□□□ 0.13
CCHCR1-211ENST00000467553 FAM205CA6NFA0 338 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 CHMP2AO43633 222 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 MARCH6O60337 910 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 DGKIO75912 1065 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 PSAPP07602 524 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 KCNA5P22460 613 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 CTNNB1P35222 781 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 ZNF484Q5JVG2 852 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 PDXDC2PQ6P474 469 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 MTHFD1LQ6UB35 978 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 MOXD1Q6UVY6 613 aa15.85■□□□□ 0.13
CCHCR1-211ENST00000467553 NPAS4Q8IUM7 802 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms