RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 CYP26B1Q9NR63 512 aa5□□□□□ -1.61
CPS1-205ENST00000467353 HCSTQ9UBK5 93 aa5□□□□□ -1.61
CPS1-205ENST00000467353 ARPP21Q9UBL0 812 aaPredicted RBP5□□□□□ -1.61
CPS1-205ENST00000467353 WNT16Q9UBV4 365 aa5□□□□□ -1.61
CPS1-205ENST00000467353 USP18Q9UMW8 372 aa5□□□□□ -1.61
CPS1-205ENST00000467353 DUSP12Q9UNI6 340 aa5□□□□□ -1.61
CPS1-205ENST00000467353 SIT1Q9Y3P8 196 aa5□□□□□ -1.61
CPS1-205ENST00000467353 DYNC1LI1Q9Y6G9 523 aaKnown RBP5□□□□□ -1.61
CPS1-205ENST00000467353 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 FSD2A1L4K1 749 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 B4DLN1 442 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 H3BRB1 525 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 NMT2O60551 498 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 CLASP2O75122 1294 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 RNF40O75150 1001 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 EIF3JO75822 258 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 MRPL12P52815 198 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 TFAP4Q01664 338 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 SP2Q02086 613 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 RING1Q06587 406 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 SPEM2Q0P670 501 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 FUT2Q10981 343 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 STXBP2Q15833 593 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 SWI5Q1ZZU3 235 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 ATAT1Q5SQI0 421 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 RARS2Q5T160 578 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 SWT1Q5T5J6 900 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 BTNL9Q6UXG8 535 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 RUFY4Q6ZNE9 571 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 TRIM50Q86XT4 487 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 NPAS4Q8IUM7 802 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 KDF1Q8NAX2 398 aaPredicted RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 EPS8L1Q8TE68 723 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 STK32AQ8WU08 396 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 ATRIPQ8WXE1 791 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 CASP10Q92851 521 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 SPATA33Q96N06 139 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 KCNK17Q96T54 332 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 DNAJC2Q99543 621 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 TCF25Q9BQ70 676 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 TUT1Q9H6E5 874 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 TYW1Q9NV66 732 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 COL20A1Q9P218 1284 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 DBR1Q9UK59 544 aaKnown RBP4.99□□□□□ -1.61
CPS1-205ENST00000467353 CA14Q9ULX7 337 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 LHX6Q9UPM6 363 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 TNNQ9UQP3 1299 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 PCDHB12Q9Y5F1 795 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 HCFC2Q9Y5Z7 792 aa4.99□□□□□ -1.61
CPS1-205ENST00000467353 TRIP12Q14669 1992 aaPredicted RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 BPTFQ12830 3046 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 ITPR1Q14643 2758 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 SOWAHDA6NJG2 315 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 SMAPO00193 183 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 GDF9O60383 454 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 LILRB5O75023 590 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 TSPY3P0CV98 308 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 TSPY8P0CW00 308 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 TCF3P15923 654 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 CD52P31358 61 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 ATP1A2P50993 1020 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 RARSP54136 660 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 CSTF1Q05048 431 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 SLFN5Q08AF3 891 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 MGAT3Q09327 533 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 UBE3CQ15386 1083 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 ZNF528Q3MIS6 628 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 FBXO47Q5MNV8 452 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 CELF3Q5SZQ8 465 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 SPOUT1Q5T280 376 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 FAM102BQ5T8I3 360 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 SYDE2Q5VT97 1194 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 KIAA1841Q6NSI8 718 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 PHLDB3Q6NSJ2 640 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 XRRA1Q6P2D8 792 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 THNSL1Q8IYQ7 743 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 SLC44A3Q8N4M1 653 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 MRPL43Q8N983 215 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 COLGALT1Q8NBJ5 622 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 ZBTB44Q8NCP5 570 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 NETO1Q8TDF5 533 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 SYTL5Q8TDW5 730 aaPredicted RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 NSUN6Q8TEA1 469 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 MRPS27Q92552 414 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 SECISBP2LQ93073 1101 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 IWS1Q96ST2 819 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 FOXQ1Q9C009 403 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 EPC1Q9H2F5 836 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 IL1RAPL2Q9NP60 686 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 IL17RBQ9NRM6 502 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 FKBPLQ9UIM3 349 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 SMG5Q9UPR3 1016 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 TELO2Q9Y4R8 837 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 PCDHGA2Q9Y5H1 932 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 MRVI1Q9Y6F6 885 aa4.98□□□□□ -1.61
CPS1-205ENST00000467353 DSPP15924 2871 aaKnown RBP4.98□□□□□ -1.61
CPS1-205ENST00000467353 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
CPS1-205ENST00000467353 ATG2AQ2TAZ0 1938 aa4.97□□□□□ -1.61
CPS1-205ENST00000467353 MICAL3Q7RTP6 2002 aa4.97□□□□□ -1.61
CPS1-205ENST00000467353 MYO5AQ9Y4I1 1855 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms