RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 RTN4RL1Q86UN2 441 aaPredicted RBP11.22□□□□□ -0.61
USP39-212ENST00000465514 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 ZDHHC14Q8IZN3 488 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 SIX5Q8N196 739 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 GPKOWQ92917 476 aaPredicted RBP eCLIP11.22□□□□□ -0.61
USP39-212ENST00000465514 MLXIPQ9HAP2 919 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 PNMA6FA0A0J9YX94 578 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 ERICH2A1L162 156 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 HIDE1A8MVS5 230 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 CYTH3O43739 400 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 STAG3L1P0CL83 205 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 IBSPP21815 317 aaPredicted RBP11.21□□□□□ -0.61
USP39-212ENST00000465514 CHMLP26374 656 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 CD52P31358 61 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 ATXN1P54253 815 aaKnown RBP11.21□□□□□ -0.61
USP39-212ENST00000465514 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 ZC3H14Q6PJT7 736 aaKnown RBP11.21□□□□□ -0.61
USP39-212ENST00000465514 THNSL1Q8IYQ7 743 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 RUFY2Q8WXA3 655 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 TCF25Q9BQ70 676 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 ADAM7Q9H2U9 754 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
USP39-212ENST00000465514 ENTPD7Q9NQZ7 604 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 FBXL21Q9UKT6 434 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 TAF6LQ9Y6J9 622 aa11.21□□□□□ -0.61
USP39-212ENST00000465514 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
USP39-212ENST00000465514 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 E7EWF7 191 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 NOP56O00567 594 aaKnown RBP11.2□□□□□ -0.62
USP39-212ENST00000465514 SCG2P13521 617 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 ITIH3Q06033 890 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 TROAPQ12815 778 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 WTAPQ15007 396 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 RALYLQ86SE5 291 aaKnown RBP11.2□□□□□ -0.62
USP39-212ENST00000465514 COLGALT1Q8NBJ5 622 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 CASP10Q92851 521 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
USP39-212ENST00000465514 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 SPEGQ15772 3267 aa11.2□□□□□ -0.62
USP39-212ENST00000465514 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 STK25O00506 426 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 ADRB1P08588 477 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 SDHBP21912 280 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 MTHFRP42898 656 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 MRPS9P82933 396 aaKnown RBP11.19□□□□□ -0.62
USP39-212ENST00000465514 SART3Q15020 963 aaKnown RBP11.19□□□□□ -0.62
USP39-212ENST00000465514 ACAP1Q15027 740 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 TAF2Q6P1X5 1199 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 CATIPQ7Z7H3 387 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 SUMF1Q8NBK3 374 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 NCOA7Q8NI08 942 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 CDV3Q9UKY7 258 aaKnown RBP11.19□□□□□ -0.62
USP39-212ENST00000465514 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 DUSP12Q9UNI6 340 aa11.19□□□□□ -0.62
USP39-212ENST00000465514 FRMPD4Q14CM0 1322 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 SPATA31C2B4DYI2 1134 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 SGSM2O43147 1006 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 SP9P0CG40 484 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 ANTXR2P58335 489 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 MRPS6P82932 125 aaKnown RBP11.18□□□□□ -0.62
USP39-212ENST00000465514 TDGQ13569 410 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 GNPTABQ3T906 1256 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
USP39-212ENST00000465514 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
USP39-212ENST00000465514 KIAA1841Q6NSI8 718 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 CYFIP1Q7L576 1253 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 IGDCC4Q8TDY8 1250 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 DNAJB3Q8WWF6 145 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 INPP4AQ96PE3 977 aaPredicted RBP11.18□□□□□ -0.62
USP39-212ENST00000465514 GPR20Q99678 358 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 RTEL1Q9NZ71 1219 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 DBR1Q9UK59 544 aaKnown RBP11.18□□□□□ -0.62
USP39-212ENST00000465514 LZTS1Q9Y250 596 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 TELO2Q9Y4R8 837 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 HCFC2Q9Y5Z7 792 aa11.18□□□□□ -0.62
USP39-212ENST00000465514 STAM2O75886 525 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 EOMESO95936 686 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
USP39-212ENST00000465514 RFX1P22670 979 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 SEMA3FQ13275 785 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 NEDD9Q14511 834 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 SPECC1Q5M775 1068 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms