RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 PHOSPHO2Q8TCD6 241 aa14.69□□□□□ -0.06
COL28A1-206ENST00000465339 GJA10Q969M2 543 aa14.69□□□□□ -0.06
COL28A1-206ENST00000465339 OCEL1Q9H607 264 aa14.69□□□□□ -0.06
COL28A1-206ENST00000465339 CEP131Q9UPN4 1083 aa14.69□□□□□ -0.06
COL28A1-206ENST00000465339 EVPLQ92817 2033 aa14.69□□□□□ -0.06
COL28A1-206ENST00000465339 IGSF9BQ9UPX0 1349 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 SMIM35A0A1B0GVV1 85 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 ABHD14A-ACY1A0A1B0GW23 586 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 KLRC1P26715 233 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 PPP2R5CQ13362 524 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 GNL2Q13823 731 aaKnown RBP14.68□□□□□ -0.06
COL28A1-206ENST00000465339 IKBKEQ14164 716 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 IER5Q5VY09 327 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 MTHFD1LQ6UB35 978 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 DEFB123Q8N688 67 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 DNAJB3Q8WWF6 145 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 HAS1Q92839 578 aa14.68□□□□□ -0.06
COL28A1-206ENST00000465339 TMEM265A0A087WTH1 108 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 CHRNA1P02708 482 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 CTSHP09668 335 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 RAB30Q15771 203 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 PLEKHG4Q58EX7 1191 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 TRAPPC12Q8WVT3 735 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 SLC9A7Q96T83 725 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 PCDHA12Q9UN75 941 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
COL28A1-206ENST00000465339 GBF1Q92538 1859 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 LAMA3Q16787 3333 aa14.67□□□□□ -0.06
COL28A1-206ENST00000465339 LOXHD1Q8IVV2 1947 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 ZBTB42B2RXF5 422 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 M0QZ92 97 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 MAGEB2O15479 319 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 ZNF862O60290 1169 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 DKC1O60832 514 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL28A1-206ENST00000465339 OATP04181 439 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 ATP2A2P16615 1042 aaKnown RBP14.66□□□□□ -0.06
COL28A1-206ENST00000465339 U2AF2P26368 475 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL28A1-206ENST00000465339 KCNJ6P48051 423 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 MRPS6P82932 125 aaKnown RBP14.66□□□□□ -0.06
COL28A1-206ENST00000465339 PRKCEQ02156 737 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 ORC2Q13416 577 aaPredicted RBP14.66□□□□□ -0.06
COL28A1-206ENST00000465339 XKR3Q5GH77 459 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 NOSTRINQ8IVI9 506 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 DBF4BQ8NFT6 615 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 SEPT8Q92599 483 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 FAM49AQ9H0Q0 323 aaPredicted RBP14.66□□□□□ -0.06
COL28A1-206ENST00000465339 MSRAQ9UJ68 235 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 VAV3Q9UKW4 847 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 SQORQ9Y6N5 450 aa14.66□□□□□ -0.06
COL28A1-206ENST00000465339 NEMFO60524 1076 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 P4HBP07237 508 aaKnown RBP14.65□□□□□ -0.06
COL28A1-206ENST00000465339 DNAJB2P25686 324 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 GJB2P29033 226 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 TRAPPC10P48553 1259 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 PSMC5P62195 406 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 MGAT3Q09327 533 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 EPHA7Q15375 998 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 CALCRLQ16602 461 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 UGCGQ16739 394 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 TRMT1LQ7Z2T5 733 aaKnown RBP14.65□□□□□ -0.06
COL28A1-206ENST00000465339 USP38Q8NB14 1042 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 APBB2Q92870 758 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 NIFKQ9BYG3 293 aaKnown RBP14.65□□□□□ -0.06
COL28A1-206ENST00000465339 PBX4Q9BYU1 374 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 MTMR10Q9NXD2 777 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 NOL7Q9UMY1 257 aaKnown RBP14.65□□□□□ -0.06
COL28A1-206ENST00000465339 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 PCDHA11Q9Y5I1 949 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 CDY2AQ9Y6F7 541 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 MICAL3Q7RTP6 2002 aa14.65□□□□□ -0.06
COL28A1-206ENST00000465339 SIP14410 1827 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 KIF28PB7ZC32 967 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 EML1O00423 815 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 C22orf31O95567 290 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 ATP2B1P20020 1258 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 QARSP47897 775 aaKnown RBP14.64□□□□□ -0.07
COL28A1-206ENST00000465339 WDR5P61964 334 aaKnown RBP14.64□□□□□ -0.07
COL28A1-206ENST00000465339 FAM43BQ6ZT52 329 aaPredicted RBP14.64□□□□□ -0.07
COL28A1-206ENST00000465339 Q7L0L9 218 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 ZNF710Q8N1W2 664 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 PDCD7Q8N8D1 485 aaKnown RBP14.64□□□□□ -0.07
COL28A1-206ENST00000465339 TIFAQ96CG3 184 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 ZBTB10Q96DT7 871 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 MTMR9Q96QG7 549 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 CELF4Q9BZC1 486 aaKnown RBP14.64□□□□□ -0.07
COL28A1-206ENST00000465339 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
COL28A1-206ENST00000465339 TRPV2Q9Y5S1 764 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 KDM3AQ9Y4C1 1321 aa14.64□□□□□ -0.07
COL28A1-206ENST00000465339 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 STBD1O95210 358 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 TMOD1P28289 359 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 MCM7P33993 719 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 PBX2P40425 430 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 TXKP42681 527 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 SPIRE1Q08AE8 756 aa14.63□□□□□ -0.07
COL28A1-206ENST00000465339 CUL4AQ13619 759 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms