RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 OLFML3Q9NRN5 406 aa20.51■□□□□ 0.87
TSPAN4-210ENST00000464987 ADAM21Q9UKJ8 722 aa20.51■□□□□ 0.87
TSPAN4-210ENST00000464987 PACSIN2Q9UNF0 486 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-210ENST00000464987 FAM13AO94988 1023 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 FTCDO95954 541 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 CAP2P40123 477 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 DGKZQ13574 1117 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 ZNF571Q7Z3V5 609 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 ZNF577Q9BSK1 485 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 SIX2Q9NPC8 291 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 VPS18Q9P253 973 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 FER1L6Q2WGJ9 1857 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 DDX39AO00148 427 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 PHACTR2O75167 634 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 TCP1P17987 556 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 TNNT3P45378 269 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 SLC7A5Q01650 507 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 KIAA0753Q2KHM9 967 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 ZNF572Q7Z3I7 529 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 RNF10Q8N5U6 811 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 PKD2L1Q9P0L9 805 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 FAN1Q9Y2M0 1017 aa20.5■□□□□ 0.87
TSPAN4-210ENST00000464987 KCNA3P22001 575 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 INPP5BP32019 993 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 FAM193AP78312 1265 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 NAB2Q15742 525 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 NBPF9Q3BBW0 867 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 CCNI2Q6ZMN8 369 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 MMGT1Q8N4V1 131 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 MSL3Q8N5Y2 521 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 BANK1Q8NDB2 785 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 CCDC102AQ96A19 550 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 SPAG5Q96R06 1193 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 CAMKK2Q96RR4 588 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 PLCB1Q9NQ66 1216 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 STK32BQ9NY57 414 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 COL20A1Q9P218 1284 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 MRPL11Q9Y3B7 192 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 EPB41P11171 864 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 BORCS6Q96GS4 357 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 PGAP2Q9UHJ9 254 aa20.49■□□□□ 0.87
TSPAN4-210ENST00000464987 EIF3JO75822 258 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-210ENST00000464987 PSMD1Q99460 953 aa20.48■□□□□ 0.87
TSPAN4-210ENST00000464987 PARVGQ9HBI0 331 aa20.48■□□□□ 0.87
TSPAN4-210ENST00000464987 GCNT4Q9P109 453 aa20.48■□□□□ 0.87
TSPAN4-210ENST00000464987 DPEP1P16444 411 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 RPL13P26373 211 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 CCDC181Q5TID7 509 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 RBM12Q9NTZ6 932 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 ZNF536O15090 1300 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 ZC3H4Q9UPT8 1303 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 GAP43P17677 238 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 ITGB5P18084 799 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 GPS2Q13227 327 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 IQCEQ6IPM2 695 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 B3GNT9Q6UX72 402 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 IL31RAQ8NI17 732 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 UPF1Q92900 1129 aaKnown RBP eCLIP20.47■□□□□ 0.872e-9■■■■■ 55.1
TSPAN4-210ENST00000464987 LXNQ9BS40 222 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 GOLPH3Q9H4A6 298 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 HPCAL4Q9UM19 191 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
TSPAN4-210ENST00000464987 IPO5O00410 1097 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 NFIBO00712 420 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 WNT10BO00744 389 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 SLC16A3O15427 465 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 TBC1D12O60347 775 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 ZNF720Q7Z2F6 126 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 RIN2Q8WYP3 895 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 SELENOOQ9BVL4 669 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 METTL14Q9HCE5 456 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 GRID2IPA4D2P6 1211 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 EIF3DO15371 548 aaKnown RBP eCLIP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 SYF2O95926 243 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 MCM3P25205 808 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 TRAF1Q13077 416 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 PTPROQ16827 1216 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 GBP6Q6ZN66 633 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 MAEAQ7L5Y9 396 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 FAM160B2Q86V87 743 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 ZNF341Q9BYN7 854 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 WDR11Q9BZH6 1224 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 FEM1BQ9UK73 627 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 PCDHGC5Q9Y5F6 944 aa20.46■□□□□ 0.87
TSPAN4-210ENST00000464987 LOXHD1Q8IVV2 1947 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 JAM2P57087 298 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 ITIH3Q06033 890 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 FAM186BQ8IYM0 893 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 TXLNBQ8N3L3 684 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 TEKT3Q9BXF9 490 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 PLEKHA4Q9H4M7 779 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 CCPG1Q9ULG6 757 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 PLA2G6O60733 806 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 PTGER2P43116 358 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 ZNF131P52739 623 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 RNASE9P60153 205 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms