RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	JAK3	P52333	1124 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	MDM2	Q00987	491 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	HYI	Q5T013	277 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	SWSAP1	Q6NVH7	229 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	POTEG	Q6S5H5	508 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	ABHD15	Q6UXT9	468 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	CHRDL2	Q6WN34	429 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	KRBA2	Q6ZNG9	492 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	TRIM50	Q86XT4	487 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	GRAMD1C	Q8IYS0	662 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	STAM	Q92783	540 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	GDF15	Q99988	308 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	DDX19A	Q9NUU7	478 aa	Known RBP	13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	ERAP1	Q9NZ08	941 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870	PCDHA10	Q9Y5I2	948 aa		13.77	□□□□□ -0.21
PTPN7-205	ENST00000464870		E9PMD0	336 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	BACH1	O14867	736 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	ZBTB39	O15060	712 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	ATG7	O95352	703 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	P4HB	P07237	508 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	GNAT1	P11488	350 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	CYP2C9	P11712	490 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	SFN	P31947	248 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	STAT5B	P51692	787 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	DHX8	Q14562	1220 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	PTGIS	Q16647	500 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	HAUS3	Q68CZ6	603 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	GDF6	Q6KF10	455 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	MIS18BP1	Q6P0N0	1132 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	PDXDC2P	Q6P474	469 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	IQUB	Q8NA54	791 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	CNNM3	Q8NE01	707 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	RDM1	Q8NG50	284 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	ERCC4	Q92889	916 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	BAD	Q92934	168 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	PCYT2	Q99447	389 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	LXN	Q9BS40	222 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	PPP1R12C	Q9BZL4	782 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	HIPK3	Q9H422	1215 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	CLSTN2	Q9H4D0	955 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	TUFT1	Q9NNX1	390 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	BLOC1S4	Q9NUP1	217 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	GABBR1	Q9UBS5	961 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	STK24	Q9Y6E0	443 aa		13.76	□□□□□ -0.21
PTPN7-205	ENST00000464870	EMSY	Q7Z589	1322 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	KDM3A	Q9Y4C1	1321 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	C17orf102	A2RUQ5	167 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	LGR5	O75473	907 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	PSAP	P07602	524 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	SLFN14	P0C7P3	912 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	SMIM10L2A	P0DMW4	78 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	SMIM10L2B	P0DMW5	78 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	BMP8B	P34820	402 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	AFM	P43652	599 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	QARS	P47897	775 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	BFSP2	Q13515	415 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	MCM6	Q14566	821 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	FAM160B1	Q5W0V3	765 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	PLPPR4	Q7Z2D5	763 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	CEP57L1	Q8IYX8	460 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	TMEM199	Q8N511	208 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	CCDC155	Q8N6L0	562 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	PIGO	Q8TEQ8	1089 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	RAD54L	Q92698	747 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	TIGD1	Q96MW7	591 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	UBE2O	Q9C0C9	1292 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	GZF1	Q9H116	711 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	NUP62CL	Q9H1M0	184 aa		13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	COLQ	Q9Y215	455 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-205	ENST00000464870	NRCAM	Q92823	1304 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	TMEM150B	A6NC51	233 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	SLC26A4	O43511	780 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	ZNF862	O60290	1169 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	PRR29	P0C7W0	189 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	ITGB8	P26012	769 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	MARK3	P27448	753 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	CASP1	P29466	404 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	CYP2C18	P33260	490 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	SLC26A2	P50443	739 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	PSMC5	P62195	406 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	CCDC183	Q5T5S1	534 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	MFSD5	Q6N075	450 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	RETREG2	Q8NC44	543 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	NEK9	Q8TD19	979 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	ATP6V0A1	Q93050	837 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	PAGE5	Q96GU1	130 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	MTR	Q99707	1265 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	NOC4L	Q9BVI4	516 aa	Known RBP	13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	NT5C3A	Q9H0P0	336 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	RNPEP	Q9H4A4	650 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	ZSWIM4	Q9H7M6	989 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	ZNF302	Q9NR11	478 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	USP25	Q9UHP3	1055 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	CEP290	O15078	2479 aa		13.74	□□□□□ -0.21
PTPN7-205	ENST00000464870	IGKV6D-21	A0A0A0MT36	114 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	STBD1	O95210	358 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 106 ms