RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 MCTP2Q6DN12 878 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 NFXL1Q6ZNB6 911 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 ADGRD2Q7Z7M1 963 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 AGO4Q9HCK5 861 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 TMEM161AQ9NX61 479 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 USP15Q9Y4E8 981 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 NID2Q14112 1375 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 DMDP11532 3685 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 CARNS1A5YM72 827 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 C9IYK1 514 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 HOXA2O43364 376 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 LAG3P18627 525 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 PPM1AP35813 382 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 NRIP1P48552 1158 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 IGBP1P78318 339 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 SIGLEC14Q08ET2 396 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 DUSP6Q16828 381 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 ANO3Q9BYT9 981 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 LSG1Q9H089 658 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 LRFN2Q9ULH4 789 aa16.59■□□□□ 0.25
DNMT3A-207ENST00000461228 VPS13AQ96RL7 3174 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 ESYT2A0FGR8 921 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 TMEM221A6NGB7 291 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 M0R296 226 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 GPR182O15218 404 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 RPS6KA5O75582 802 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 ADCY7P51828 1080 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 ZXDAP98168 799 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 PLCB3Q01970 1234 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 FUT2Q10981 343 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 CLUL1Q15846 466 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 MICU3Q86XE3 530 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 SUGP1Q8IWZ8 645 aaKnown RBP16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 SMAP1Q8IYB5 467 aaPredicted RBP16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 CEP131Q9UPN4 1083 aa16.58■□□□□ 0.24
DNMT3A-207ENST00000461228 ZBTB42B2RXF5 422 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 SLC27A2O14975 620 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 FGF18O76093 207 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 C22orf31O95567 290 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 HOXB8P17481 243 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 CRYBB1P53674 252 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 NAPAP54920 295 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 NECTIN1Q15223 517 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 LRRC43Q8N309 656 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 FBXL6Q8N531 539 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 BARX2Q9UMQ3 279 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
DNMT3A-207ENST00000461228 PLXNA3P51805 1871 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 IGLV3-22A0A075B6J6 115 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 DENND3A2RUS2 1198 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 CCNE2O96020 404 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 CYP3A4P08684 503 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 FAM189BP81408 668 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 PAN2Q504Q3 1202 aaKnown RBP16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 ZNF746Q6NUN9 644 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 CCDC60Q8IWA6 550 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 KIAA0319LQ8IZA0 1049 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 PRSS33Q8NF86 280 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 TRAPPC12Q8WVT3 735 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 TMEM40Q8WWA1 233 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 ASIC4Q96FT7 647 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 TMEM117Q9H0C3 514 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 IGFLR1Q9H665 355 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 TLE6Q9H808 572 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 NGRNQ9NPE2 291 aaKnown RBP16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 PKD2L1Q9P0L9 805 aa16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 MAFBQ9Y5Q3 323 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-207ENST00000461228 MGEA5O60502 916 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 RXRAP19793 462 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 KLRC1P26715 233 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 TMEM62Q0P6H9 643 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 PTPN21Q16825 1174 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 SYNE3Q6ZMZ3 975 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 CMTR1Q8N1G2 835 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 CYP2W1Q8TAV3 490 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 MRPS27Q92552 414 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 FAM167AQ96KS9 214 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 ADAM2Q99965 735 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 ZNF302Q9NR11 478 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 TBC1D22BQ9NU19 505 aa16.55■□□□□ 0.24
DNMT3A-207ENST00000461228 IPO5O00410 1097 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 DHX15O43143 795 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms