RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 AMHP03971 560 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 VCPP55072 806 aaKnown RBP14.15□□□□□ -0.14
HDAC4-207ENST00000461113 RBL2Q08999 1139 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 NPY5RQ15761 445 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 CTC1Q2NKJ3 1217 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 CYFIP1Q7L576 1253 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 ASCL5Q7RTU5 278 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 TMEM192Q8IY95 271 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 MYOCDQ8IZQ8 938 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 PPTC7Q8NI37 304 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 AFG1LQ8WV93 481 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 IRF2BPLQ9H1B7 796 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 TBC1D22BQ9NU19 505 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
HDAC4-207ENST00000461113 DDX25Q9UHL0 483 aaKnown RBP14.15□□□□□ -0.14
HDAC4-207ENST00000461113 TANC1Q9C0D5 1861 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 SPTBN4Q9H254 2564 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 VPS37CA5D8V6 355 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-207ENST00000461113 H0Y858 1186 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
HDAC4-207ENST00000461113 PPFIA4O75335 1185 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 ARHGAP1Q07960 439 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 HYAL1Q12794 435 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 SMAD4Q13485 552 aaKnown RBP14.14□□□□□ -0.15
HDAC4-207ENST00000461113 Q4G0T1 1027 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 MYSM1Q5VVJ2 828 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 NOSTRINQ8IVI9 506 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 CRYGNQ8WXF5 182 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 AGO4Q9HCK5 861 aaKnown RBP14.14□□□□□ -0.15
HDAC4-207ENST00000461113 JPH1Q9HDC5 661 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-207ENST00000461113 TLR9Q9NR96 1032 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 NFASCO94856 1347 aa14.14□□□□□ -0.15
HDAC4-207ENST00000461113 CYP3A7-CYP3A51PA0A087WV96 503 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 FAM86B1E9PN63 330 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SORBS3O60504 671 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 GAS7O60861 476 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 LGR5O75473 907 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 FAM86B2P0C5J1 330 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 ARP10275 920 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 ATP2B1P20020 1258 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 CYP3A7P24462 503 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 AVPR2P30518 371 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SP2Q02086 613 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SP4Q02446 784 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 MBTPS1Q14703 1052 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 ZNF618Q5T7W0 954 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 PPP4R3AQ6IN85 833 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SESTD1Q86VW0 696 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SEPT1Q8WYJ6 367 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
HDAC4-207ENST00000461113 YME1L1Q96TA2 773 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SLC9A2Q9UBY0 812 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 CD207Q9UJ71 328 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
HDAC4-207ENST00000461113 PROB1E7EW31 1015 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 TBX10O75333 385 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 MMP3P08254 477 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 KCNA2P16389 499 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.15
HDAC4-207ENST00000461113 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.15
HDAC4-207ENST00000461113 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
HDAC4-207ENST00000461113 ID4P47928 161 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 SEMA3FQ13275 785 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 ORC2Q13416 577 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-207ENST00000461113 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 SLFN12Q8IYM2 578 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 DBF4BQ8NFT6 615 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 KAT2BQ92831 832 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 TNFRSF25Q93038 417 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 FAM20AQ96MK3 541 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 RIT2Q99578 217 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 TEKT3Q9BXF9 490 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 IGFLR1Q9H665 355 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 AZI2Q9H6S1 392 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 ZNF215Q9UL58 517 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-207ENST00000461113 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 SIP14410 1827 aa14.12□□□□□ -0.15
HDAC4-207ENST00000461113 PTPRZ1P23471 2315 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-207ENST00000461113 IGLV3-22A0A075B6J6 115 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 PRR23AA6NEV1 266 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 TBX3O15119 743 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 LINC01565O15544 149 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 NEMFO60524 1076 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 ATP9AO75110 1047 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 UPP2O95045 317 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 TDP2O95551 362 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 KRT76Q01546 638 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 SIGLEC14Q08ET2 396 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-207ENST00000461113 TRIM71Q2Q1W2 868 aaKnown RBP14.11□□□□□ -0.15
HDAC4-207ENST00000461113 RILPL1Q5EBL4 403 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 LRCH2Q5VUJ6 765 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 MIS18BP1Q6P0N0 1132 aa14.11□□□□□ -0.15
HDAC4-207ENST00000461113 BRAPQ7Z569 592 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 259.9 ms