RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 SEMA4AQ9H3S1 761 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
AGRN-203ENST00000461111 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
AGRN-203ENST00000461111 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 SUN1O94901 812 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 LCA5LO95447 670 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 GSTA1P08263 222 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 CREB1P16220 341 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 RIPK1Q13546 671 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 UBE2SQ16763 222 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 VSIG1Q86XK7 387 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 LMNTD2Q8IXW0 634 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 SCFD2Q8WU76 684 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 FAM84BQ96KN1 310 aaPredicted RBP13.53□□□□□ -0.24
AGRN-203ENST00000461111 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
AGRN-203ENST00000461111 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 CCDC169A6NNP5 214 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 ASAP2O43150 1006 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.24
AGRN-203ENST00000461111 TDP2O95551 362 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 FGFR1OPO95684 399 aaKnown RBP13.52□□□□□ -0.24
AGRN-203ENST00000461111 PAEPP09466 180 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 PTK2Q05397 1052 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 LAMB3Q13751 1172 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 TRIM4Q9C037 500 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 NUCKS1Q9H1E3 243 aaKnown RBP13.52□□□□□ -0.24
AGRN-203ENST00000461111 SH3BP1Q9Y3L3 701 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 C2CD2Q9Y426 696 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 MED1Q15648 1581 aaPredicted RBP13.52□□□□□ -0.24
AGRN-203ENST00000461111 PNPLA7Q6ZV29 1317 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.24
AGRN-203ENST00000461111 MYMKA6NI61 221 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 USP11P51784 963 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 ITIH4Q14624 930 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 PLS1Q14651 629 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 IFI16Q16666 785 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 RNF220Q5VTB9 566 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 FBXO25Q8TCJ0 367 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 U2AF1L4Q8WU68 220 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 ATXN2LQ8WWM7 1075 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 PBKQ96KB5 322 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 DAAM1Q9Y4D1 1078 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 SNX3O60493 162 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 RFC5P40937 340 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 PDE6CP51160 858 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 ALKBH5Q6P6C2 394 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 ZNF449Q6P9G9 518 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 NEK8Q86SG6 692 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 DDX12PQ92771 950 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 TMEM237Q96Q45 408 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 RPS6KC1Q96S38 1066 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 PTPN22Q9Y2R2 807 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 AFDNP55196 1824 aaKnown RBP13.52□□□□□ -0.25
AGRN-203ENST00000461111 ADAMTSL3P82987 1691 aa13.52□□□□□ -0.25
AGRN-203ENST00000461111 MEIS1O00470 390 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 SLC16A2P36021 539 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 ERFP50548 548 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 TXNRD3Q86VQ6 643 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 DR1Q01658 176 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 TNIP1Q15025 636 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 CENPPQ6IPU0 288 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 CNBD1Q8NA66 436 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
AGRN-203ENST00000461111 LARP4BQ92615 738 aaKnown RBP13.51□□□□□ -0.25
AGRN-203ENST00000461111 NUDT12Q9BQG2 462 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 RASGRF2O14827 1237 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 ACSL3O95573 720 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 MYBP10242 640 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 GBP1P32455 592 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 NBPF5PQ86XG9 351 aaPredicted RBP13.51□□□□□ -0.25
AGRN-203ENST00000461111 FITM2Q8N6M3 262 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 RDH13Q8NBN7 331 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 TLCD1Q96CP7 247 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
AGRN-203ENST00000461111 SYT15Q9BQS2 421 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 CEP72Q9P209 647 aa13.51□□□□□ -0.25
AGRN-203ENST00000461111 NOL4O94818 638 aa13.5□□□□□ -0.25
AGRN-203ENST00000461111 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
AGRN-203ENST00000461111 CWF19L1Q69YN2 538 aaKnown RBP13.5□□□□□ -0.25
AGRN-203ENST00000461111 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
AGRN-203ENST00000461111 B4GALNT2Q8NHY0 566 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms