RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ZNF396Q96N95 335 aaPredicted RBP14.36□□□□□ -0.11
COL18A1-206ENST00000459895 CEP89Q96ST8 783 aa14.36□□□□□ -0.11
COL18A1-206ENST00000459895 MMTAG2Q9BU76 263 aaKnown RBP14.36□□□□□ -0.11
COL18A1-206ENST00000459895 POLR3CQ9BUI4 534 aaPredicted RBP14.36□□□□□ -0.11
COL18A1-206ENST00000459895 RAB34Q9BZG1 259 aa14.36□□□□□ -0.11
COL18A1-206ENST00000459895 FAM49AQ9H0Q0 323 aaPredicted RBP14.36□□□□□ -0.11
COL18A1-206ENST00000459895 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
COL18A1-206ENST00000459895 TUFT1Q9NNX1 390 aa14.36□□□□□ -0.11
COL18A1-206ENST00000459895 BMP2KQ9NSY1 1161 aaPredicted RBP14.36□□□□□ -0.11
COL18A1-206ENST00000459895 MICAL3Q7RTP6 2002 aa14.36□□□□□ -0.11
COL18A1-206ENST00000459895 CEP290O15078 2479 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 RANBP2P49792 3224 aaKnown RBP14.35□□□□□ -0.11
COL18A1-206ENST00000459895 ZBTB39O15060 712 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 DKC1O60832 514 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL18A1-206ENST00000459895 LYPLA2O95372 231 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 YEATS4O95619 227 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 TIMP1P01033 207 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 CKBP12277 381 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 RPA1P27694 616 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 THPOP40225 353 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 CLCN3P51790 818 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 NPEPPSP55786 919 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 BFSP2Q13515 415 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 STK38Q15208 465 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 ECM1Q16610 540 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 TAF2Q6P1X5 1199 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 LRRC71Q8N4P6 559 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 LINC01465Q8N7H1 131 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 LINC00301Q8NCQ3 95 aa14.35□□□□□ -0.11
COL18A1-206ENST00000459895 NIFKQ9BYG3 293 aaKnown RBP14.35□□□□□ -0.11
COL18A1-206ENST00000459895 RBM19Q9Y4C8 960 aaKnown RBP14.35□□□□□ -0.11
COL18A1-206ENST00000459895 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
COL18A1-206ENST00000459895 GBF1Q92538 1859 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 A0A087WWV3 80 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 CSF2RAP15509 400 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 SELPP16109 830 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 KLRC1P26715 233 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 FPGSQ05932 587 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 MGAT3Q09327 533 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 TBC1D8BQ0IIM8 1120 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 SLC39A14Q15043 492 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 PRPF38BQ5VTL8 546 aaKnown RBP14.34□□□□□ -0.11
COL18A1-206ENST00000459895 MFSD5Q6N075 450 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 PIGOQ8TEQ8 1089 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
COL18A1-206ENST00000459895 CLIC6Q96NY7 704 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 PPP1R16BQ96T49 567 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 CSRNP2Q9H175 543 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 CYP26B1Q9NR63 512 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
COL18A1-206ENST00000459895 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
COL18A1-206ENST00000459895 SMIM35A0A1B0GVV1 85 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 CAND2O75155 1236 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 LONP1P36776 959 aaKnown RBP14.33□□□□□ -0.12
COL18A1-206ENST00000459895 RARRES1P49788 294 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 EPHB4P54760 987 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 TMEM62Q0P6H9 643 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 DRP2Q13474 957 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 PDIA5Q14554 519 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 EMC2Q15006 297 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 TMEM119Q4V9L6 283 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 XKR9Q5GH70 373 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 KRT79Q5XKE5 535 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 KCNK18Q7Z418 384 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 LRRC15Q8TF66 581 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 VWCEQ96DN2 955 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 CEP170P1Q96L14 293 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 AK8Q96MA6 479 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 CCDC43Q96MW1 224 aaKnown RBP14.33□□□□□ -0.12
COL18A1-206ENST00000459895 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 GDF15Q99988 308 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 LBHD1Q9BQE6 289 aaPredicted RBP14.33□□□□□ -0.12
COL18A1-206ENST00000459895 NRBP2Q9NSY0 501 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 DDX19AQ9NUU7 478 aaKnown RBP14.33□□□□□ -0.12
COL18A1-206ENST00000459895 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
COL18A1-206ENST00000459895 SPTLC2O15270 562 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 USO1O60763 962 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 VTNP04004 478 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 NCLP19338 710 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 POLGP54098 1239 aaPredicted RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 MRPS6P82932 125 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 GRB10Q13322 594 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 ZRSR1Q15695 479 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 HYIQ5T013 277 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 USP49Q70CQ1 688 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 RPAINQ86UA6 219 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 CABP7Q86V35 215 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 METTL13Q8N6R0 699 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 SYMPKQ92797 1274 aaKnown RBP14.32□□□□□ -0.12
COL18A1-206ENST00000459895 OSBPL7Q9BZF2 842 aa14.32□□□□□ -0.12
COL18A1-206ENST00000459895 XPNPEP1Q9NQW7 623 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms