RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 OR2W6PQ8NHA6 318 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 RPGRIP1Q96KN7 1286 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
LINC00959-201ENST00000456581 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 KRT12Q99456 494 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 LSM14BQ9BX40 385 aaKnown RBP13.62□□□□□ -0.23
LINC00959-201ENST00000456581 FAM107BQ9H098 131 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 HOMER2Q9NSB8 354 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 PANK4Q9NVE7 773 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 PHF20L1A8MW92 1017 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 MYO1FO00160 1098 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 MCM3P25205 808 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 GMPSP49915 693 aaPredicted RBP13.61□□□□□ -0.23
LINC00959-201ENST00000456581 MMP14P50281 582 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 ASTE1Q2TB18 679 aaPredicted RBP13.61□□□□□ -0.23
LINC00959-201ENST00000456581 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 KCNV1Q6PIU1 500 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 KLHL7Q8IXQ5 586 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 FAM133AQ8N9E0 248 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 TSGA10Q9BZW7 698 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 GLT8D2Q9H1C3 349 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 PKD2L1Q9P0L9 805 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 ADAMTS1Q9UHI8 967 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
LINC00959-201ENST00000456581 A0A087X0T9 212 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 PVALEFA0A1B0GWK0 134 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 FAM228BP0C875 321 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 CYP11B2P19099 503 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 GTF2A1P52655 376 aaPredicted RBP13.61□□□□□ -0.23
LINC00959-201ENST00000456581 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 ICE2Q659A1 982 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 LDHDQ86WU2 507 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 DDX42Q86XP3 938 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00959-201ENST00000456581 ALS2CR12Q96Q35 445 aa13.61□□□□□ -0.23
LINC00959-201ENST00000456581 ZNF233A6NK53 670 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 RSPH10B2B2RC85 870 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 SHOX2O60902 331 aaPredicted RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 HEXIM1O94992 359 aaKnown RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 RSPH10BP0C881 870 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 HNRNPH3P31942 346 aaKnown RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 CASP5P51878 434 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 TGFB2P61812 414 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 HERC4Q5GLZ8 1057 aaPredicted RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 FIGNQ5HY92 759 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 TADA2BQ86TJ2 420 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 MTMR14Q8NCE2 650 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 PIGOQ8TEQ8 1089 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 IGLV3-22A0A075B6J6 115 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 CDK17Q00537 523 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 CTTNQ14247 550 aaKnown RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 FAM26FQ5R3K3 315 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 RNPC3Q96LT9 517 aaKnown RBP13.6□□□□□ -0.23
LINC00959-201ENST00000456581 IKZF4Q9H2S9 585 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 CENPHQ9H3R5 247 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 VAV3Q9UKW4 847 aa13.6□□□□□ -0.23
LINC00959-201ENST00000456581 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 NFIBO00712 420 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 Q4G0T1 1027 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 HYIQ5T013 277 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 FKBP1CQ5VVH2 108 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 CCDC70Q6NSX1 233 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 NLGN2Q8NFZ4 835 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 PIK3R5Q8WYR1 880 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 TBC1D12O60347 775 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 FOSP01100 380 aaPredicted RBP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 KRT18P05783 430 aaKnown RBP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 ASNSP08243 561 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 SLC12A3P55017 1021 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 NNTQ13423 1086 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 IQCEQ6IPM2 695 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 SLFN12Q8IYM2 578 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 GUF1Q8N442 669 aaKnown RBP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 CHURC1Q8WUH1 139 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 CASKIN2Q8WXE0 1202 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 BHMT2Q9H2M3 363 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 COL20A1Q9P218 1284 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 HACL1Q9UJ83 578 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 GCOM1H8Y6P7 765 aaPredicted RBP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 EIF3HO15372 352 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC00959-201ENST00000456581 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 ARP10275 920 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 SEMA3FQ13275 785 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 SPRED3Q2MJR0 410 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 WNK4Q96J92 1243 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 SH3GL2Q99962 352 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 NT5C3AQ9H0P0 336 aa13.59□□□□□ -0.23
LINC00959-201ENST00000456581 DDX39AO00148 427 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms