RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CEP55Q53EZ4 464 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 FAM160B2Q86V87 743 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 RUBCNQ92622 972 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC35C1Q96A29 364 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 ZBTB9Q96C00 473 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 PSMD1Q99460 953 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 ZMYM2Q9UBW7 1377 aa20.14■□□□□ 0.82
SEMA3B-209ENST00000456560 COL4A5P29400 1685 aa20.14■□□□□ 0.82
SEMA3B-209ENST00000456560 SFI1A8K8P3 1242 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 ARID5AQ03989 594 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 NFIL3Q16649 462 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 B3GNT9Q6UX72 402 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 SGIP1Q9BQI5 828 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 DEFB129Q9H1M3 183 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 EHMT1Q9H9B1 1298 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 SIX2Q9NPC8 291 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 ADAMTS1Q9UHI8 967 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 FBXL5Q9UKA1 691 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 ZBTB39O15060 712 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 FAM13AO94988 1023 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 MYBL2P10244 700 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 EPB41P11171 864 aaKnown RBP20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 CXCR5P32302 372 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 AARSP49588 968 aaKnown RBP eCLIP20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 UBXN2AP68543 259 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 CDAN1Q8IWY9 1227 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 RTKN2Q8IZC4 609 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 FIZ1Q96SL8 496 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 ACBD3Q9H3P7 528 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.81
SEMA3B-209ENST00000456560 BTNL10A8MVZ5 291 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 CLIC2O15247 247 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 CHMP2AO43633 222 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 PALMO75781 387 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 NMT1P30419 496 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 ACTN2P35609 894 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 PTGER2P43116 358 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 CCDC70Q6NSX1 233 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 MYCT1Q8N699 235 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 FAM71BQ8TC56 605 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 LRRC1Q9BTT6 524 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 SMARCAL1Q9NZC9 954 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 PGAP2Q9UHJ9 254 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 FEM1BQ9UK73 627 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 HPCAL4Q9UM19 191 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 BZW2Q9Y6E2 419 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 FRMPD4Q14CM0 1322 aa20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 ZC3H4Q9UPT8 1303 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-209ENST00000456560 GAS7O60861 476 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 ARP10275 920 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 PRKCIP41743 596 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 ZNF131P52739 623 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 PTK2Q05397 1052 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 C10orf76Q5T2E6 689 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 LEKR1Q6ZMV7 388 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 GBP6Q6ZN66 633 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 ZNF571Q7Z3V5 609 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 LDHDQ86WU2 507 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 OGFOD1Q8N543 542 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 NACC1Q96RE7 527 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 PSMB7Q99436 277 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 PACSIN1Q9BY11 444 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 UNC45AQ9H3U1 944 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 MED4Q9NPJ6 270 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 EHD2Q9NZN4 543 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 GTPBP10A4D1E9 387 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 CAP2P40123 477 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 NAP1L1P55209 391 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 KIAA0753Q2KHM9 967 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 DCAF17Q5H9S7 520 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 TTLL6Q8N841 843 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 AENQ8WTP8 325 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 HDAC7Q8WUI4 952 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 WDR11Q9BZH6 1224 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 TMEM39BQ9GZU3 492 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 PARVGQ9HBI0 331 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 WRAP73Q9P2S5 460 aaPredicted RBP20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 RNF14Q9UBS8 474 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 SEL1LQ9UBV2 794 aa20.12■□□□□ 0.81
SEMA3B-209ENST00000456560 VGLL3A8MV65 326 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 PAFAH1B1P43034 410 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 JAM2P57087 298 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 MEI1Q5TIA1 1274 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 CCDC181Q5TID7 509 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 SPAG5Q96R06 1193 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 ZNF577Q9BSK1 485 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 GLIS2Q9BZE0 524 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 FBXO28Q9NVF7 368 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 DMGDHQ9UI17 866 aaKnown RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 NENFQ9UMX5 172 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 FAN1Q9Y2M0 1017 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 SHTN1A0MZ66 631 aa20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 SETQ01105 290 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-209ENST00000456560 MAP3K10Q02779 954 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms