RNA–Protein interactions for RNA: ENST00000455611.6

OTUD4-203, Transcript of OTU deubiquitinase 4, humanhuman

TSL 5

Gene OTUD4, Length 2,498 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-203ENST00000455611 RIMS2Q9UQ26 1411 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 XRN1Q8IZH2 1706 aaKnown RBP2.24□□□□□ -2.05
OTUD4-203ENST00000455611 TUBGCP6Q96RT7 1819 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 CFAP47Q6ZTR5 3102 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 CENPFP49454 3210 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 NPHP3-ACAD11A0A0J9YXS1 232 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 CRKP46108 304 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 ZNF143P52747 638 aaPredicted RBP2.24□□□□□ -2.05
OTUD4-203ENST00000455611 NOGQ13253 232 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 SMAD4Q13485 552 aaKnown RBP2.24□□□□□ -2.05
OTUD4-203ENST00000455611 MROH9Q5TGP6 573 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 SLFN13Q68D06 897 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 CD300LDQ6UXZ3 194 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 DNAJC14Q6Y2X3 702 aaPredicted RBP2.24□□□□□ -2.05
OTUD4-203ENST00000455611 RIOX2Q8IUF8 465 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 KLHL36Q8N4N3 616 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 C19orf47Q8N9M1 422 aaKnown RBP2.24□□□□□ -2.05
OTUD4-203ENST00000455611 CLIC6Q96NY7 704 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 GORASP1Q9BQQ3 440 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 SEC61A2Q9H9S3 476 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 CDK11AQ9UQ88 783 aaPredicted RBP2.24□□□□□ -2.05
OTUD4-203ENST00000455611 TTC21AQ8NDW8 1320 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 KIAA0232Q92628 1395 aa2.24□□□□□ -2.05
OTUD4-203ENST00000455611 ASH1LQ9NR48 2969 aaKnown RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 RBBP6Q7Z6E9 1792 aaKnown RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 KDM6AO15550 1401 aaPredicted RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 IQCA1LA6NCM1 817 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 SUPT5HO00267 1087 aaKnown RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 MUSKO15146 869 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 IFNGR1P15260 489 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 DPEP1P16444 411 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 PRR31Q5SQ13 230 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 PRAMEF18Q5VWM3 479 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 FAM109BQ6ICB4 259 aaPredicted RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 PKN3Q6P5Z2 889 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 POMZP3Q6PJE2 187 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 ARHGEF39Q8N4T4 335 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 TMEM209Q96SK2 561 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 CDX2Q99626 313 aaPredicted RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 PCED1AQ9H1Q7 454 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 TAF1DQ9H5J8 278 aaPredicted RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 L2HGDHQ9H9P8 463 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 JADE2Q9NQC1 790 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 ST6GALNAC2Q9UJ37 374 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 RWDD3Q9Y3V2 267 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 CLIP1P30622 1438 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 FUCA1P04066 466 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 TP53P04637 393 aaPredicted RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 CHGBP05060 677 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 ACRP10323 421 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 SLC7A5Q01650 507 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 PPP2R5DQ14738 602 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 TDRD10Q5VZ19 366 aaKnown RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 DCAF15Q66K64 600 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 MCTP2Q6DN12 878 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 SPRED1Q7Z699 444 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 ADAT2Q7Z6V5 191 aaKnown RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 PPFIBP1Q86W92 1011 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 DNERQ8NFT8 737 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 ASB2Q96Q27 587 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 YIPF4Q9BSR8 244 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 KCNH6Q9H252 994 aa2.23□□□□□ -2.05
OTUD4-203ENST00000455611 BARX1Q9HBU1 254 aaPredicted RBP2.23□□□□□ -2.05
OTUD4-203ENST00000455611 SBF1O95248 1867 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 COL18A1P39060 1754 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 N4BP2Q86UW6 1770 aaPredicted RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 ACEP12821 1306 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 DDX3XO00571 662 aaKnown RBP eCLIP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 MYO1BO43795 1136 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 ZNF28P17035 718 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 RPL11P62913 178 aaKnown RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 GNPTABQ3T906 1256 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 DALRD3Q5D0E6 543 aaKnown RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 SMIM5Q71RC9 77 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 SYNE4Q8N205 404 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 AMER2Q8N7J2 671 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 ATXN2LQ8WWM7 1075 aaKnown RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 YTHDC1Q96MU7 727 aaKnown RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 APBA2Q99767 749 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 CD248Q9HCU0 757 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 PPP4R1LQ9P1A2 415 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 FTSJ1Q9UET6 329 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 COA3Q9Y2R0 106 aaPredicted RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 ZNF292O60281 2723 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 KNDC1Q76NI1 1749 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 TROQ12816 1431 aaPredicted RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 C7orf72A4D263 438 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 ZNF623O75123 536 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 DDNO94850 711 aaPredicted RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 SLPIP03973 132 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 FOSL2P15408 326 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 IL13P35225 146 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 CDSNQ15517 529 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 CST9Q5W186 159 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 E4F1Q66K89 784 aaPredicted RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 LIMS2Q7Z4I7 341 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 SPATA18Q8TC71 538 aa2.22□□□□□ -2.05
OTUD4-203ENST00000455611 TOE1Q96GM8 510 aaKnown RBP2.22□□□□□ -2.05
OTUD4-203ENST00000455611 HAUS7Q99871 368 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms