RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.834e-6■■■□□ 18.8
PTPA-223ENST00000452489 LRMDAQ9H2I8 198 aa20.21■□□□□ 0.83
PTPA-223ENST00000452489 SEMA6BQ9H3T3 888 aa20.21■□□□□ 0.83
PTPA-223ENST00000452489 SLITRK6Q9H5Y7 841 aa20.21■□□□□ 0.83
PTPA-223ENST00000452489 CTTNBP2NLQ9P2B4 639 aa20.21■□□□□ 0.83
PTPA-223ENST00000452489 CTNNAL1Q9UBT7 734 aa20.21■□□□□ 0.83
PTPA-223ENST00000452489 NR2E1Q9Y466 385 aa20.21■□□□□ 0.83
PTPA-223ENST00000452489 CCDC188H7C350 402 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 ZBTB48P10074 688 aaPredicted RBP20.2■□□□□ 0.82
PTPA-223ENST00000452489 EPHB2P29323 1055 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 SFSWAPQ12872 951 aaKnown RBP20.2■□□□□ 0.82
PTPA-223ENST00000452489 DDX50Q9BQ39 737 aaKnown RBP20.2■□□□□ 0.82
PTPA-223ENST00000452489 SLX1AQ9BQ83 275 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 MYLK2Q9H1R3 596 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 CARD9Q9H257 536 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 DENND2DQ9H6A0 471 aaPredicted RBP20.2■□□□□ 0.82
PTPA-223ENST00000452489 ZDHHC18Q9NUE0 388 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 ZNF532Q9HCE3 1301 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 CETN3O15182 167 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 TJP3O95049 919 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 COPB2P35606 906 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 KCNMA1Q12791 1236 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 CCDC84Q86UT8 332 aaPredicted RBP20.2■□□□□ 0.82
PTPA-223ENST00000452489 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 TXLNGQ9NUQ3 528 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 TMCO1Q9UM00 188 aa20.2■□□□□ 0.82
PTPA-223ENST00000452489 PLEKHA8P1O95397 391 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 MCAMP43121 646 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 PLTPP55058 493 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 SLC18A3Q16572 532 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 C6orf118Q5T5N4 469 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 DAAM2Q86T65 1068 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 EXOC3L1Q86VI1 746 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 SESTD1Q86VW0 696 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 ANKRD42Q8N9B4 389 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 LUC7LQ9NQ29 371 aaKnown RBP20.19■□□□□ 0.82
PTPA-223ENST00000452489 KLHL14Q9P2G3 628 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 FOXO6A8MYZ6 492 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 SERPING1P05155 500 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 SPDYCQ5MJ68 293 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 SFMBT2Q5VUG0 894 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 NRG4Q8WWG1 115 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 VCX3BQ9H321 246 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 VCX3AQ9NNX9 186 aa20.19■□□□□ 0.82
PTPA-223ENST00000452489 GH1P01241 217 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 DESP17661 470 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 LONP1P36776 959 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 CCNFP41002 786 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 POU5F1Q01860 360 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 AUHQ13825 339 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 MFSD6Q6ZSS7 791 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 TBC1D10AQ9BXI6 508 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 NAPBQ9H115 298 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 TSPYL2Q9H2G4 693 aaPredicted RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 PIH1D3Q9NQM4 214 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 METTL5Q9NRN9 209 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 KBTBD4Q9NVX7 518 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 RPTORQ8N122 1335 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 TMEM120BA0PK00 339 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 HNRNPRO43390 633 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 UBTFL6P0CB48 400 aaPredicted RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 KLRC3Q07444 240 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 MAN2A1Q16706 1144 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 VSIG1Q86XK7 387 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 AGGF1Q8N302 714 aaeCLIP20.18■□□□□ 0.82
PTPA-223ENST00000452489 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 LRRC8CQ8TDW0 803 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 SCG3Q8WXD2 468 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 ERP27Q96DN0 273 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 FAM192AQ9GZU8 254 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 MAF1Q9H063 256 aa20.18■□□□□ 0.82
PTPA-223ENST00000452489 BZW2Q9Y6E2 419 aaKnown RBP20.18■□□□□ 0.82
PTPA-223ENST00000452489 FGFR4P22455 802 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 VHLP40337 213 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 Q4G0T1 1027 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 ADAT2Q7Z6V5 191 aaKnown RBP20.17■□□□□ 0.82
PTPA-223ENST00000452489 IFNL3Q8IZI9 196 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 FBXO25Q8TCJ0 367 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 GATA6Q92908 595 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 PFDN1O60925 122 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 SKIP12755 728 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 TATP17735 454 aaPredicted RBP20.17■□□□□ 0.82
PTPA-223ENST00000452489 DEUP1Q05D60 604 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 MPP3Q13368 585 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 SNX30Q5VWJ9 437 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 LRRC57Q8N9N7 239 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 STRBPQ96SI9 672 aaKnown RBP20.17■□□□□ 0.82
PTPA-223ENST00000452489 SPATA16Q9BXB7 569 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 TANGO6Q9C0B7 1094 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 KIAA1683Q9H0B3 1180 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
PTPA-223ENST00000452489 C5P01031 1676 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 MAGEA13PA6NCF6 341 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 ZCCHC18P0CG32 403 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 KHDC1Q4VXA5 237 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms