RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 NCK2O43639 380 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
COL27A1-202ENST00000451716 RASA3Q14644 834 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 MAEAQ7L5Y9 396 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■□□□□ 10.5
COL27A1-202ENST00000451716 COL20A1Q9P218 1284 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-202ENST00000451716 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 TRAF3IP3Q9Y228 551 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 SLC26A4O43511 780 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 FAM13AO94988 1023 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 NR3C1P04150 777 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 DNA2P51530 1060 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 MRPS25P82663 173 aaKnown RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 COG2Q14746 738 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 BRD3Q15059 726 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 BEND6Q5SZJ8 279 aaPredicted RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 GOLGA6L1Q8N7Z2 621 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 COG1Q8WTW3 980 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 SYNPO2Q9UMS6 1093 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 LCA5LO95447 670 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 HOXA7P31268 230 aaPredicted RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 PRELPP51888 382 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 PLS1Q14651 629 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 SLC9C1Q4G0N8 1177 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 DNAJC14Q6Y2X3 702 aaPredicted RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 ZC3H3Q8IXZ2 948 aaKnown RBP13.24□□□□□ -0.29
COL27A1-202ENST00000451716 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 TSGA10Q9BZW7 698 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 MYOZ2Q9NPC6 264 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 ADAMTS1Q9UHI8 967 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 PGAP2Q9UHJ9 254 aa13.24□□□□□ -0.29
COL27A1-202ENST00000451716 FAM170AA1A519 330 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 IPO5O00410 1097 aaKnown RBP13.23□□□□□ -0.29
COL27A1-202ENST00000451716 TACC1O75410 805 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 ASNSP08243 561 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 ITGB5P18084 799 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 GSCP56915 257 aaPredicted RBP13.23□□□□□ -0.29
COL27A1-202ENST00000451716 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 SMC1AQ14683 1233 aaKnown RBP13.23□□□□□ -0.29
COL27A1-202ENST00000451716 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 HOOK2Q96ED9 719 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 ZNF536O15090 1300 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 KLHL33A6NCF5 533 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 TBC1D12O60347 775 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 ZBTB7AO95365 584 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 XRCC5P13010 732 aaKnown RBP13.23□□□□□ -0.29
COL27A1-202ENST00000451716 PPP2R5CQ13362 524 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 PACSIN1Q9BY11 444 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 WDR11Q9BZH6 1224 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 GANQ9H2C0 597 aa13.23□□□□□ -0.29
COL27A1-202ENST00000451716 A0A087X0T9 212 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 PDXKO00764 312 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 CALUO43852 315 aaPredicted RBP13.22□□□□□ -0.29
COL27A1-202ENST00000451716 SERPING1P05155 500 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 FAM228BP0C875 321 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 ALAS1P13196 640 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 FAM83AQ86UY5 434 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 LXNQ9BS40 222 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 RAVER2Q9HCJ3 691 aaKnown RBP13.22□□□□□ -0.29
COL27A1-202ENST00000451716 TUFT1Q9NNX1 390 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 TYW1Q9NV66 732 aaKnown RBP13.22□□□□□ -0.29
COL27A1-202ENST00000451716 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 AFPP02771 609 aaKnown RBP13.22□□□□□ -0.29
COL27A1-202ENST00000451716 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
COL27A1-202ENST00000451716 PTGER2P43116 358 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.299e-7■■□□□ 11.7
COL27A1-202ENST00000451716 KLHL30Q0D2K2 578 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 AJAP1Q9UKB5 411 aaPredicted RBP13.22□□□□□ -0.29
COL27A1-202ENST00000451716 SNX12Q9UMY4 172 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 PSME4Q14997 1843 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 SSU72P8A0A1W2PR75 194 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 ANO9A1A5B4 782 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 PON1P27169 355 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 TRAF1Q13077 416 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 EXOC3L4Q17RC7 722 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 FKBP1CQ5VVH2 108 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms