RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NRBP2Q9NSY0 501 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 KDM3AQ9Y4C1 1321 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 COL4A4P53420 1690 aaPredicted RBP17.24■□□□□ 0.35
CHD3-205ENST00000449744 CYP3A7-CYP3A51PA0A087WV96 503 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 CYP3A7P24462 503 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 NPY5RQ15761 445 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 INF2Q27J81 1249 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 MIER3Q7Z3K6 550 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 KIAA0319LQ8IZA0 1049 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 FIBCD1Q8N539 461 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 METTL13Q8N6R0 699 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 UNC45AQ9H3U1 944 aa17.24■□□□□ 0.35
CHD3-205ENST00000449744 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
CHD3-205ENST00000449744 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
CHD3-205ENST00000449744 MYH9P35579 1960 aaKnown RBP17.24■□□□□ 0.35
CHD3-205ENST00000449744 ZBTB42B2RXF5 422 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 MAGEB2O15479 319 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 C22orf31O95567 290 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 OATP04181 439 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 NEK4P51957 841 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
CHD3-205ENST00000449744 AAK1Q2M2I8 961 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 EPC2Q52LR7 807 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 RDM1Q8NG50 284 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 GJA10Q969M2 543 aa17.23■□□□□ 0.35
CHD3-205ENST00000449744 PRRC2BQ5JSZ5 2229 aaKnown RBP17.23■□□□□ 0.35
CHD3-205ENST00000449744 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 DTNBO60941 627 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 RPS6KA5O75582 802 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 PSMD10O75832 226 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 STAG3L1P0CL83 205 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 TMOD1P28289 359 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 PRKCEQ02156 737 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 TMEM192Q8IY95 271 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 COG5Q9UP83 839 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 VCANP13611 3396 aa17.22■□□□□ 0.35
CHD3-205ENST00000449744 ADGRA3Q8IWK6 1321 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 COL4A6Q14031 1691 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 GPR182O15218 404 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 ZNF862O60290 1169 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.35
CHD3-205ENST00000449744 GPM6BQ13491 265 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 BTG3Q14201 252 aaPredicted RBP17.21■□□□□ 0.35
CHD3-205ENST00000449744 ME3Q16798 604 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 PTPROQ16827 1216 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 EFCAB12Q6NXP0 572 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
CHD3-205ENST00000449744 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 NPAS4Q8IUM7 802 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 NAP1L4Q99733 375 aaKnown RBP17.21■□□□□ 0.35
CHD3-205ENST00000449744 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 GJB4Q9NTQ9 266 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 AKT3Q9Y243 479 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
CHD3-205ENST00000449744 RWDD3Q9Y3V2 267 aa17.21■□□□□ 0.35
CHD3-205ENST00000449744 TNFRSF10AO00220 468 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 MARCH6O60337 910 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
CHD3-205ENST00000449744 SEC24BO95487 1268 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 VTNP04004 478 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
CHD3-205ENST00000449744 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
CHD3-205ENST00000449744 CTNNB1P35222 781 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 CLCN3P51790 818 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 UGCGQ16739 394 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 RTN4RL1Q86UN2 441 aaPredicted RBP17.2■□□□□ 0.34
CHD3-205ENST00000449744 ETNPPLQ8TBG4 499 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 HLA-CQ95604 372 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 OSMRQ99650 979 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
CHD3-205ENST00000449744 DENND3A2RUS2 1198 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 H3BNC9 293 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 SLC37A4O43826 429 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 DGKIO75912 1065 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 LARGE1O95461 756 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 KRT2P35908 639 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 TFF2Q03403 129 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 TBC1D8BQ0IIM8 1120 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 TRIM29Q14134 588 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 XKR3Q5GH77 459 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 PPP4R3AQ6IN85 833 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 ZNF710Q8N1W2 664 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 LRRC71Q8N4P6 559 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms