RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 SCN10AQ9Y5Y9 1956 aa10.3□□□□□ -0.76
RFX3-207ENST00000449190 TRIOBPQ9H2D6 2365 aa10.3□□□□□ -0.76
RFX3-207ENST00000449190 C17orf102A2RUQ5 167 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 SPTLC2O15270 562 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 ATG7O95352 703 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 CCNE2O96020 404 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 ACRP10323 421 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 MARCKSP29966 332 aaPredicted RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 LONP1P36776 959 aaKnown RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 NASPP49321 788 aaPredicted RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 SLC26A2P50443 739 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 STAT5BP51692 787 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 KRT79Q5XKE5 535 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 PLPPR4Q7Z2D5 763 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 LINC00301Q8NCQ3 95 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 NEK9Q8TD19 979 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 AFAP1L1Q8TED9 768 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 ATP6V0A1Q93050 837 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 SCLYQ96I15 445 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 SPATA32Q96LK8 384 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 SCAND2PQ9GZW5 306 aaPredicted RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 MTIF3Q9H2K0 278 aaKnown RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 NRBP2Q9NSY0 501 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 ERAP1Q9NZ08 941 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 GABBR1Q9UBS5 961 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 VAV3Q9UKW4 847 aa10.29□□□□□ -0.76
RFX3-207ENST00000449190 SRPRBQ9Y5M8 271 aaKnown RBP10.29□□□□□ -0.76
RFX3-207ENST00000449190 PPP6R2O75170 966 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 LGR5O75473 907 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 SMIM10L2AP0DMW4 78 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 SMIM10L2BP0DMW5 78 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 SELPP16109 830 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 HOXC8P31273 242 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 TXLNAP40222 546 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 UBA7P41226 1012 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 QARSP47897 775 aaKnown RBP10.28□□□□□ -0.76
RFX3-207ENST00000449190 ME1P48163 572 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 PSMC5P62195 406 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 ZNF200P98182 395 aaPredicted RBP10.28□□□□□ -0.76
RFX3-207ENST00000449190 PTPAQ15257 358 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 HAUS3Q68CZ6 603 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 TPH2Q8IWU9 490 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 RASSF8Q8NHQ8 419 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 DHX38Q92620 1227 aaKnown RBP10.28□□□□□ -0.76
RFX3-207ENST00000449190 CDK5RAP3Q96JB5 506 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 AK8Q96MA6 479 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 EIF2AK1Q9BQI3 630 aaKnown RBP10.28□□□□□ -0.76
RFX3-207ENST00000449190 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
RFX3-207ENST00000449190 ZSWIM4Q9H7M6 989 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 RCOR1Q9UKL0 485 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 TELO2Q9Y4R8 837 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 MORC2Q9Y6X9 1032 aaPredicted RBP10.28□□□□□ -0.76
RFX3-207ENST00000449190 NRCAMQ92823 1304 aa10.28□□□□□ -0.76
RFX3-207ENST00000449190 MYH7BA7E2Y1 1941 aa10.27□□□□□ -0.76
RFX3-207ENST00000449190 GOLGA6L4A6NEF3 574 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 DDX11L8A8MPP1 907 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 EML1O00423 815 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 CUTAO60888 179 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 CKBP12277 381 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 ACTN1P12814 892 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
RFX3-207ENST00000449190 CCT6AP40227 531 aaKnown RBP10.27□□□□□ -0.77
RFX3-207ENST00000449190 ADAM17P78536 824 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 HIC1Q14526 733 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 TRIM71Q2Q1W2 868 aaKnown RBP10.27□□□□□ -0.77
RFX3-207ENST00000449190 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 OTUD6AQ7L8S5 288 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 SERINC5Q86VE9 423 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 IGSF22Q8N9C0 903 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 VWCEQ96DN2 955 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 CALML4Q96GE6 196 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 DYDC2Q96IM9 177 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 FAM167AQ96KS9 214 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 CCDC43Q96MW1 224 aaKnown RBP10.27□□□□□ -0.77
RFX3-207ENST00000449190 PCYT2Q99447 389 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 SETD4Q9NVD3 440 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 EMSYQ7Z589 1322 aa10.27□□□□□ -0.77
RFX3-207ENST00000449190 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 IGKV6D-21A0A0A0MT36 114 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 TREHO43280 583 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 SLC26A4O43511 780 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 HBP1O60381 514 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 CAND2O75155 1236 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 SLITRK3O94933 977 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 MUTP22033 750 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 MARK3P27448 753 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 GPNMBQ14956 572 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 ZRSR1Q15695 479 aaKnown RBP10.26□□□□□ -0.77
RFX3-207ENST00000449190 IL17AQ16552 155 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 XKR3Q5GH77 459 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 LRRC8DQ7L1W4 858 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 OTOP2Q7RTS6 562 aa10.26□□□□□ -0.77
RFX3-207ENST00000449190 TRMT1LQ7Z2T5 733 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms