RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 NIFKQ9BYG3 293 aaKnown RBP13.24□□□□□ -0.29
RCL1-208ENST00000448872 NRBP2Q9NSY0 501 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 LMBRD1Q9NUN5 540 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 FAM13BQ9NYF5 915 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 HPSEQ9Y251 543 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 STK24Q9Y6E0 443 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
RCL1-208ENST00000448872 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
RCL1-208ENST00000448872 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 HBP1O60381 514 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 LIG1P18858 919 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 RARRES1P49788 294 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 DHX8Q14562 1220 aaKnown RBP13.23□□□□□ -0.29
RCL1-208ENST00000448872 TARBP2Q15633 366 aaKnown RBP13.23□□□□□ -0.29
RCL1-208ENST00000448872 E2F4Q16254 413 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 RRAGBQ5VZM2 374 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 SLC39A5Q6ZMH5 540 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 SLC43A3Q8NBI5 491 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 CEP170P1Q96L14 293 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 TRPV6Q9H1D0 765 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 BHMT2Q9H2M3 363 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 TRMT13Q9NUP7 481 aaKnown RBP13.23□□□□□ -0.29
RCL1-208ENST00000448872 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 GTF2IRD1Q9UHL9 959 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 FAM237AA0A1B0GTK4 181 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 ARVCFO00192 962 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 TREHO43280 583 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
RCL1-208ENST00000448872 SSBP05455 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
RCL1-208ENST00000448872 CDK7P50613 346 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 MCM6Q14566 821 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 LRRC26Q2I0M4 334 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 TRIM60Q495X7 471 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 NFRKBQ6P4R8 1299 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 RUFY4Q6ZNE9 571 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 RAD54LQ92698 747 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 NT5C3AQ9H0P0 336 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
RCL1-208ENST00000448872 NRCAMQ92823 1304 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
RCL1-208ENST00000448872 SLC26A4O43511 780 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 B4GALT4O60513 344 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
RCL1-208ENST00000448872 C22orf31O95567 290 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 EYA4O95677 639 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 MUTP22033 750 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 KLRC1P26715 233 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 HOXC8P31273 242 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 STAT6P42226 847 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 SLC12A3P55017 1021 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 UBE2HP62256 183 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 ADAM17P78536 824 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 CCDC73Q6ZRK6 1079 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 STAMQ92783 540 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 WNT8BQ93098 351 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 RUSC1Q9BVN2 902 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
RCL1-208ENST00000448872 DBR1Q9UK59 544 aaKnown RBP13.22□□□□□ -0.29
RCL1-208ENST00000448872 DOCK5Q9H7D0 1870 aa13.21□□□□□ -0.29
RCL1-208ENST00000448872 NPHP3-ACAD11A0A0J9YXS1 232 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.3
RCL1-208ENST00000448872 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.3
RCL1-208ENST00000448872 NR1I2O75469 434 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 XRCC6P12956 609 aaKnown RBP eCLIP13.21□□□□□ -0.3
RCL1-208ENST00000448872 MCM4P33991 863 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 SYKP43405 635 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 DRP2Q13474 957 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 SNW1Q13573 536 aaKnown RBP13.21□□□□□ -0.3
RCL1-208ENST00000448872 PTGISQ16647 500 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 PADI6Q6TGC4 694 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 MTHFD1LQ6UB35 978 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 MAEAQ7L5Y9 396 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 FAM126BQ8IXS8 530 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 GRAMD1CQ8IYS0 662 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 FMR1NBQ8N0W7 255 aaPredicted RBP13.21□□□□□ -0.3
RCL1-208ENST00000448872 ENGASEQ8NFI3 743 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 MTRQ99707 1265 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.3
RCL1-208ENST00000448872 MBLAC1A4D2B0 266 aaPredicted RBP13.2□□□□□ -0.3
RCL1-208ENST00000448872 CYP2C9P11712 490 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms