RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 RAB11FIP2Q7L804 512 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 NUP54Q7Z3B4 507 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 GPR155Q7Z3F1 870 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TMC6Q7Z403 805 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TTC21BQ7Z4L5 1316 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ADCK1Q86TW2 530 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 NLRP8Q86W28 1048 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 PPFIBP1Q86W92 1011 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 SIAH1Q8IUQ4 282 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 NOSTRINQ8IVI9 506 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 FAM114A1Q8IWE2 563 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CCDC83Q8IWF9 413 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TTC39CQ8N584 583 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 AADATQ8N5Z0 425 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 OR2C3Q8N628 320 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 LINC00469Q8N7U9 141 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 C19orf47Q8N9M1 422 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TSEN2Q8NCE0 465 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 BBOF1Q8ND07 529 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ANKK1Q8NFD2 765 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 IPMKQ8NFU5 416 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 OR8K3Q8NH51 312 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TTLL11Q8NHH1 800 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 MOSPD2Q8NHP6 518 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 RFWD2Q8NHY2 731 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ADAMTS15Q8TE58 950 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 RABGGTAQ92696 567 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CASP10Q92851 521 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 GPKOWQ92917 476 aaPredicted RBP eCLIP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TATDN2Q93075 761 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ARL8AQ96BM9 186 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TUBGCP3Q96CW5 907 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 SGF29Q96ES7 293 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 FUBP3Q96I24 572 aaKnown RBP eCLIP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ZC3H10Q96K80 434 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ART5Q96L15 291 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ATP6V1G3Q96LB4 118 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CNOT6LQ96LI5 555 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 LRGUKQ96M69 825 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 C7orf26Q96N11 449 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 PASKQ96RG2 1323 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 PPP1R9BQ96SB3 815 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 KIFC3Q9BVG8 833 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 APOL5Q9BWW9 433 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 STK31Q9BXU1 1019 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 RNF38Q9H0F5 515 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 GBP3Q9H0R5 595 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 C1orf21Q9H246 121 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 VPS11Q9H270 941 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 RSAD1Q9HA92 442 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 SENP2Q9HC62 589 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 SPON1Q9HCB6 807 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ROBO2Q9HCK4 1378 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ANLNQ9NQW6 1124 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 RXFP3Q9NSD7 469 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 TOR4AQ9NXH8 423 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 MCM9Q9NXL9 1143 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 AATFQ9NY61 560 aaKnown RBP eCLIP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CHMP5Q9NZZ3 219 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CEP72Q9P209 647 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 VPS18Q9P253 973 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 IFT80Q9P2H3 777 aaPredicted RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 UBA2Q9UBT2 640 aaPredicted RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 AASSQ9UDR5 926 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 DDX20Q9UHI6 824 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 VPS28Q9UK41 221 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CCPG1Q9ULG6 757 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CNOT6Q9ULM6 557 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CLEC4AQ9UMR7 237 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 PCDHGC3Q9UN70 934 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 POLIQ9UNA4 740 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 NINLQ9Y2I6 1382 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 HCN4Q9Y3Q4 1203 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 CHTOPQ9Y3Y2 248 aaKnown RBP3.06□□□□□ -1.92
UBBP3-201ENST00000445497 PCDHB9Q9Y5E1 797 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 ATP6V1DQ9Y5K8 247 aa3.06□□□□□ -1.92
UBBP3-201ENST00000445497 DHX29Q7Z478 1369 aaKnown RBP3.05□□□□□ -1.92
UBBP3-201ENST00000445497 KIF7Q2M1P5 1343 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 KRBA1A5PL33 1030 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 PGPEP1LA6NFU8 196 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 A6NLC8 198 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 BTBD11A6QL63 1104 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 MINDY4BA8MYZ0 360 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 FAM227AF5H4B4 570 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 H0YIV9 168 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 PSMD9O00233 223 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 AGRPO00253 132 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 MEN1O00255 615 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 EIF3FO00303 357 aaPredicted RBP3.05□□□□□ -1.92
UBBP3-201ENST00000445497 TPP1O14773 563 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 YKT6O15498 198 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 TTI1O43156 1089 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 DAPK3O43293 454 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 ATMINO43313 823 aaPredicted RBP3.05□□□□□ -1.92
UBBP3-201ENST00000445497 RIPK2O43353 540 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 THAP12O43422 761 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 XPOTO43592 962 aaKnown RBP3.05□□□□□ -1.92
UBBP3-201ENST00000445497 SULT1B1O43704 296 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 PRPSAP2O60256 369 aa3.05□□□□□ -1.92
UBBP3-201ENST00000445497 SEC22BO75396 215 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms