RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	SIT1	Q9Y3P8	196 aa		10.63	□□□□□ -0.71
RPE-213	ENST00000445268	PCDHB7	Q9Y5E2	793 aa		10.63	□□□□□ -0.71
RPE-213	ENST00000445268	SOBP	A7XYQ1	873 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	C1QTNF9B	B2RNN3	333 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	PROS1	P07225	676 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	C1QTNF9	P0C862	333 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	SNHG28	P0DPA3	235 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	HOXA13	P31271	388 aa	Predicted RBP	10.62	□□□□□ -0.71
RPE-213	ENST00000445268	IGBP1	P78318	339 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	SPEM2	Q0P670	501 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	SEMA3F	Q13275	785 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	LPAL2	Q16609	132 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	QRICH1	Q2TAL8	776 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	RRP12	Q5JTH9	1297 aa	Known RBP	10.62	□□□□□ -0.71
RPE-213	ENST00000445268	TSHZ3	Q63HK5	1081 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	KCNV1	Q6PIU1	500 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	OTOP3	Q7RTS5	596 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	MCF2L2	Q86YR7	1114 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	FTSJ3	Q8IY81	847 aa	Known RBP	10.62	□□□□□ -0.71
RPE-213	ENST00000445268	PJA1	Q8NG27	643 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	NETO1	Q8TDF5	533 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	NACAP1	Q9BZK3	213 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	EPC1	Q9H2F5	836 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	DZANK1	Q9NVP4	752 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	PUF60	Q9UHX1	559 aa	Known RBP	10.62	□□□□□ -0.71
RPE-213	ENST00000445268	TRPV2	Q9Y5S1	764 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	EVPL	Q92817	2033 aa		10.62	□□□□□ -0.71
RPE-213	ENST00000445268	IGSF9B	Q9UPX0	1349 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	NCL	P19338	710 aa	Known RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	HSD17B4	P51659	736 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	CSTF1	Q05048	431 aa	Known RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	MARCH8	Q5T0T0	291 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	KCNT2	Q6UVM3	1135 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	METTL7B	Q6UX53	244 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	LRRC55	Q6ZSA7	311 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	MRPL43	Q8N983	215 aa	Known RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	TOMM22	Q9NS69	142 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	IGSF9	Q9P2J2	1179 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	GMEB2	Q9UKD1	530 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	DOCK6	Q96HP0	2047 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	MAST4	O15021	2626 aa		10.61	□□□□□ -0.71
RPE-213	ENST00000445268	ASH1L	Q9NR48	2969 aa	Known RBP	10.61	□□□□□ -0.71
RPE-213	ENST00000445268	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.6	□□□□□ -0.71
RPE-213	ENST00000445268	ORC4	O43929	436 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	GDF9	O60383	454 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	SRF	P11831	508 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	CCND2	P30279	289 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	NFX1	Q12986	1120 aa	Known RBP	10.6	□□□□□ -0.71
RPE-213	ENST00000445268	ZNF528	Q3MIS6	628 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	PHLDB3	Q6NSJ2	640 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	TSSK4	Q6SA08	328 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	GPR149	Q86SP6	731 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	VSIG10L	Q86VR7	867 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	ADGRF4	Q8IZF3	695 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	ATRIP	Q8WXE1	791 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	ZNF558	Q96NG5	402 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	ADAM2	Q99965	735 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	RNF19A	Q9NV58	838 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	MRPL11	Q9Y3B7	192 aa	Known RBP	10.6	□□□□□ -0.71
RPE-213	ENST00000445268	PCDHGA2	Q9Y5H1	932 aa		10.6	□□□□□ -0.71
RPE-213	ENST00000445268	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.6	□□□□□ -0.71
RPE-213	ENST00000445268	WDFY3	Q8IZQ1	3526 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	SPDYE4	A6NLX3	237 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	LAMTOR5	O43504	91 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	SMARCA5	O60264	1052 aa	Predicted RBP	10.59	□□□□□ -0.71
RPE-213	ENST00000445268	LILRB5	O75023	590 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	TGFB3	P10600	412 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	GBP2	P32456	591 aa	Predicted RBP	10.59	□□□□□ -0.71
RPE-213	ENST00000445268	PPM1A	P35813	382 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	SHC2	P98077	582 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	CABP7	Q86V35	215 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	SLC44A3	Q8N4M1	653 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	ZBTB44	Q8NCP5	570 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	SLC22A17	Q8WUG5	538 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	TRAPPC12	Q8WVT3	735 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	SFXN1	Q9H9B4	322 aa		10.59	□□□□□ -0.71
RPE-213	ENST00000445268	DENND3	A2RUS2	1198 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.58	□□□□□ -0.72
RPE-213	ENST00000445268		C9IYK1	514 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	NT5C1B-RDH14	C9J2C7	533 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268		M0QZ92	97 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	DHX16	O60231	1041 aa	Known RBP	10.58	□□□□□ -0.72
RPE-213	ENST00000445268	TCF7	P36402	384 aa	Predicted RBP	10.58	□□□□□ -0.72
RPE-213	ENST00000445268	METAP2	P50579	478 aa	Known RBP eCLIP	10.58	□□□□□ -0.72
RPE-213	ENST00000445268	KRT17	Q04695	432 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	PTPN14	Q15678	1187 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	LETM2	Q2VYF4	491 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	GPATCH4	Q5T3I0	446 aa	Known RBP	10.58	□□□□□ -0.72
RPE-213	ENST00000445268	IER5	Q5VY09	327 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	DCLRE1A	Q6PJP8	1040 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	UNQ6494/PRO21346	Q6UXR6	183 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	STOX1	Q6ZVD7	989 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	FCHSD1	Q86WN1	690 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	SIRT2	Q8IXJ6	389 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	SLC39A11	Q8N1S5	342 aa		10.58	□□□□□ -0.72
RPE-213	ENST00000445268	CASD1	Q96PB1	797 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms