RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ANKRD20A3Q5VUR7 823 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 SNAP25P60880 206 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 IL9RQ01113 521 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 ARHGAP27Q6ZUM4 889 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PODNQ7Z5L7 613 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 STK38LQ9Y2H1 464 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 CIB2O75838 187 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 APBA3O96018 575 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PDHBP11177 359 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 POLR2BP30876 1174 aaKnown RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 STAT3P40763 770 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 BFSP1Q12934 665 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PLCD3Q8N3E9 789 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 SUGCTQ9HAC7 445 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PALM3A6NDB9 673 aaPredicted RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 ABCD1P33897 745 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PIK3CAP42336 1068 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 CDK17Q00537 523 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 SYN2Q92777 582 aaPredicted RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PSMD1Q99460 953 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 AS3MTQ9HBK9 375 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 CLRN2A0PK11 232 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 F5H6K3 240 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 RFX1P22670 979 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 KLRC3Q07444 240 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 DRAP1Q14919 205 aaPredicted RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 PALM2Q8IXS6 379 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 ANKRD35Q8N283 1001 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 RFFLQ8WZ73 363 aa17.98■□□□□ 0.47
TCOF1-206ENST00000445265 ARHGEF2Q92974 986 aaKnown RBP17.98■□□□□ 0.47
TCOF1-206ENST00000445265 KLK7P49862 253 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 NEDD9Q14511 834 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 PAPD7Q5XG87 772 aaKnown RBP17.97■□□□□ 0.47
TCOF1-206ENST00000445265 MRPL47Q9HD33 250 aaKnown RBP17.97■□□□□ 0.47
TCOF1-206ENST00000445265 ANAPC5Q9UJX4 755 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 SNX24Q9Y343 169 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 GPC5P78333 572 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 ARHGEF18Q6ZSZ5 1173 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 TRPC5Q9UL62 973 aaPredicted RBP17.97■□□□□ 0.47
TCOF1-206ENST00000445265 DAGLAQ9Y4D2 1042 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 LRRN4CLQ8ND94 238 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 I3L4J1 428 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 HIP1RO75146 1068 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 KRT19P08727 400 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 SLCO1A2P46721 670 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 POLGP54098 1239 aaPredicted RBP17.97■□□□□ 0.47
TCOF1-206ENST00000445265 PPP2R5AQ15172 486 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
TCOF1-206ENST00000445265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
TCOF1-206ENST00000445265 SLC16A3O15427 465 aaKnown RBP17.96■□□□□ 0.47
TCOF1-206ENST00000445265 EYA4O95677 639 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 CACNB3P54284 484 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 VPS52Q8N1B4 723 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 GMNCA6NCL1 334 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 FAM187AA6NFU0 413 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 SNX1Q13596 522 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 LRRIQ4A6NIV6 560 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 TBX3O15119 743 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 PPP2R2AP63151 447 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 TTBK2Q6IQ55 1244 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 CEP170P1Q96L14 293 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 TRPC6Q9Y210 931 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 SPATA31A1Q5TZJ5 1347 aa17.96■□□□□ 0.47
TCOF1-206ENST00000445265 SH3RF1Q7Z6J0 888 aa17.96■□□□□ 0.46
TCOF1-206ENST00000445265 ZBTB8OSQ8IWT0 167 aa17.96■□□□□ 0.46
TCOF1-206ENST00000445265 DYDC2Q96IM9 177 aa17.96■□□□□ 0.46
TCOF1-206ENST00000445265 RBM12Q9NTZ6 932 aaKnown RBP17.96■□□□□ 0.46
TCOF1-206ENST00000445265 PCDHB4Q9Y5E5 795 aa17.96■□□□□ 0.46
TCOF1-206ENST00000445265 GPR75-ASB3A0A0A6YYF3 556 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 PRLRP16471 622 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 ITIH3Q06033 890 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 EARS2Q5JPH6 523 aaKnown RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 RIN2Q8WYP3 895 aaPredicted RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 NBPF3Q9H094 633 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 GJA3Q9Y6H8 435 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 STAM2O75886 525 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 UCHL3P15374 230 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 SOX5P35711 763 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 CFAP157Q5JU67 520 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 CCHCR1Q8TD31 782 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 LRRC8CQ8TDW0 803 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 MYCBPQ99417 103 aaPredicted RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 EIF2AK1Q9BQI3 630 aaKnown RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 P4HA1P13674 534 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 NAB2Q15742 525 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 PPP1R21Q6ZMI0 780 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 GLYCTKQ8IVS8 523 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 MS4A14Q96JA4 679 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 RAB21Q9UL25 225 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 PFASO15067 1338 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 MAGOHP61326 146 aaKnown RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 SLC10A5Q5PT55 438 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms