RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SERPING1P05155 500 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 RPS12P25398 132 aaKnown RBP11.54□□□□□ -0.56
CALD1-210ENST00000443197 PSMC5P62195 406 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 CDKAL1Q5VV42 579 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 LMBRD2Q68DH5 695 aaPredicted RBP11.54□□□□□ -0.56
CALD1-210ENST00000443197 RINT1Q6NUQ1 792 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
CALD1-210ENST00000443197 HDXQ7Z353 690 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 MTMR9Q96QG7 549 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 HYOU1Q9Y4L1 999 aa11.54□□□□□ -0.56
CALD1-210ENST00000443197 USP54Q70EL1 1684 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 A0A1W2PQC6 194 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TLDC2A0PJX2 215 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 SCYL3Q8IZE3 742 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 C4orf32Q8N8J7 132 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 MKL1Q969V6 931 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 PARD6BQ9BYG5 372 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 ASTN2O75129 1339 aaPredicted RBP11.53□□□□□ -0.56
CALD1-210ENST00000443197 JAK3P52333 1124 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 BACE1P56817 501 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 C2orf54Q08AI8 447 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 Q3C1V9 767 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 ZBTB8OSQ8IWT0 167 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 FAM213AQ9BRX8 229 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 PLVAPQ9BX97 442 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
CALD1-210ENST00000443197 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 PACSIN2Q9UNF0 486 aaPredicted RBP11.53□□□□□ -0.56
CALD1-210ENST00000443197 ITGB4P16144 1822 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 NCK2O43639 380 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 PNMA6AP0CW24 399 aaPredicted RBP11.53□□□□□ -0.56
CALD1-210ENST00000443197 OSBPP22059 807 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TUBB2AQ13885 445 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 MESDQ14696 234 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 SYT2Q8N9I0 419 aaPredicted RBP11.53□□□□□ -0.56
CALD1-210ENST00000443197 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TUBB2BQ9BVA1 445 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 CASP4P49662 377 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 GUCY2FP51841 1108 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 APBA1Q02410 837 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 FAM160B1Q5W0V3 765 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 ZNF746Q6NUN9 644 aaPredicted RBP11.53□□□□□ -0.56
CALD1-210ENST00000443197 GSTA5Q7RTV2 222 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 NT5C1BQ96P26 610 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 MRIQ9BWK5 157 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 AMFRQ9UKV5 643 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 CEP83Q9Y592 693 aa11.53□□□□□ -0.56
CALD1-210ENST00000443197 TAF1P21675 1872 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 ERVK-24P63145 666 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 TFAMQ00059 246 aaKnown RBP11.52□□□□□ -0.56
CALD1-210ENST00000443197 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 THNSL1Q8IYQ7 743 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.56
CALD1-210ENST00000443197 RABEP2Q9H5N1 569 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 JPH1Q9HDC5 661 aaPredicted RBP11.52□□□□□ -0.56
CALD1-210ENST00000443197 ST7Q9NRC1 585 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 CEP72Q9P209 647 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 AKT3Q9Y243 479 aa11.52□□□□□ -0.56
CALD1-210ENST00000443197 NHSL1Q5SYE7 1610 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 NEFHP12036 1026 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 FERP16591 822 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 LMNB1P20700 586 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 SLC7A5Q01650 507 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 GIT2Q14161 759 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 CCDC114Q96M63 670 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 SLC9A2Q9UBY0 812 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 DDX41Q9UJV9 622 aaKnown RBP11.52□□□□□ -0.57
CALD1-210ENST00000443197 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
CALD1-210ENST00000443197 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 CLCN6P51797 869 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 MAP3K9P80192 1104 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 TKFCQ3LXA3 575 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 ZNF394Q53GI3 561 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 MUM1L1Q5H9M0 696 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 FMNL3Q8IVF7 1028 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 DUSP9Q99956 384 aaKnown RBP11.52□□□□□ -0.57
CALD1-210ENST00000443197 DUSP10Q9Y6W6 482 aa11.52□□□□□ -0.57
CALD1-210ENST00000443197 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 PDXKO00764 312 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 DESP17661 470 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 CNGA1P29973 690 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 FKBP1AP62942 108 aaKnown RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 ECM1Q16610 540 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 GJB7Q6PEY0 223 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 REXO1L1PQ8IX06 675 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 SCFD1Q8WVM8 642 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 RABGGTAQ92696 567 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 APOL6Q9BWW8 343 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 ROBO3Q96MS0 1386 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 EMSYQ7Z589 1322 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 ANKRD62A6NC57 917 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 EGFRP00533 1210 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 CD58P19256 250 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 PDE6CP51160 858 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 SOX10P56693 466 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 PPP1R7Q15435 360 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 LONRF2Q1L5Z9 754 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms