RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PKD2L1Q9P0L9 805 aa8.82□□□□□ -1
CD44-211ENST00000442151 STK17AQ9UEE5 414 aa8.82□□□□□ -1
CD44-211ENST00000442151 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
CD44-211ENST00000442151 CYP46A1Q9Y6A2 500 aa8.82□□□□□ -1
CD44-211ENST00000442151 CDY2AQ9Y6F7 541 aa8.82□□□□□ -1
CD44-211ENST00000442151 FSD2A1L4K1 749 aa8.82□□□□□ -1
CD44-211ENST00000442151 ENPP3O14638 875 aa8.82□□□□□ -1
CD44-211ENST00000442151 CPLX1O14810 134 aa8.82□□□□□ -1
CD44-211ENST00000442151 GPR182O15218 404 aa8.82□□□□□ -1
CD44-211ENST00000442151 CHRNA1P02708 482 aa8.82□□□□□ -1
CD44-211ENST00000442151 GHRP10912 638 aa8.82□□□□□ -1
CD44-211ENST00000442151 BMP1P13497 986 aa8.82□□□□□ -1
CD44-211ENST00000442151 XBP1P17861 261 aa8.82□□□□□ -1
CD44-211ENST00000442151 RPS6KB1P23443 525 aa8.82□□□□□ -1
CD44-211ENST00000442151 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
CD44-211ENST00000442151 IGBP1P78318 339 aa8.82□□□□□ -1
CD44-211ENST00000442151 SSRP1Q08945 709 aaKnown RBP8.82□□□□□ -1
CD44-211ENST00000442151 EPC2Q52LR7 807 aa8.82□□□□□ -1
CD44-211ENST00000442151 FBXO47Q5MNV8 452 aa8.82□□□□□ -1
CD44-211ENST00000442151 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
CD44-211ENST00000442151 TREML4Q6UXN2 200 aa8.82□□□□□ -1
CD44-211ENST00000442151 TRIM50Q86XT4 487 aa8.82□□□□□ -1
CD44-211ENST00000442151 RAB11FIP4Q86YS3 637 aa8.82□□□□□ -1
CD44-211ENST00000442151 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
CD44-211ENST00000442151 ATP8B4Q8TF62 1192 aa8.82□□□□□ -1
CD44-211ENST00000442151 BBXQ8WY36 941 aaPredicted RBP8.82□□□□□ -1
CD44-211ENST00000442151 WNT8BQ93098 351 aa8.82□□□□□ -1
CD44-211ENST00000442151 CELF4Q9BZC1 486 aaKnown RBP8.82□□□□□ -1
CD44-211ENST00000442151 BCAS3Q9H6U6 928 aa8.82□□□□□ -1
CD44-211ENST00000442151 C1orf112Q9NSG2 853 aa8.82□□□□□ -1
CD44-211ENST00000442151 KDM3AQ9Y4C1 1321 aa8.81□□□□□ -1
CD44-211ENST00000442151 MYO9BQ13459 2157 aa8.81□□□□□ -1
CD44-211ENST00000442151 GBF1Q92538 1859 aa8.81□□□□□ -1
CD44-211ENST00000442151 CARNS1A5YM72 827 aa8.81□□□□□ -1
CD44-211ENST00000442151 IPO5O00410 1097 aaKnown RBP8.81□□□□□ -1
CD44-211ENST00000442151 DKC1O60832 514 aaKnown RBP eCLIP8.81□□□□□ -1
CD44-211ENST00000442151 CDKL5O76039 1030 aa8.81□□□□□ -1
CD44-211ENST00000442151 ARP10275 920 aa8.81□□□□□ -1
CD44-211ENST00000442151 SFNP31947 248 aa8.81□□□□□ -1
CD44-211ENST00000442151 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
CD44-211ENST00000442151 BMPR1AP36894 532 aa8.81□□□□□ -1
CD44-211ENST00000442151 NLRP5P59047 1200 aa8.81□□□□□ -1
CD44-211ENST00000442151 MGAT3Q09327 533 aa8.81□□□□□ -1
CD44-211ENST00000442151 FUT2Q10981 343 aa8.81□□□□□ -1
CD44-211ENST00000442151 PAK2Q13177 524 aa8.81□□□□□ -1
CD44-211ENST00000442151 BTG3Q14201 252 aaPredicted RBP8.81□□□□□ -1
CD44-211ENST00000442151 PLCB4Q15147 1175 aa8.81□□□□□ -1
CD44-211ENST00000442151 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
CD44-211ENST00000442151 JAKMIP3Q5VZ66 844 aa8.81□□□□□ -1
CD44-211ENST00000442151 EXOC8Q8IYI6 725 aa8.81□□□□□ -1
CD44-211ENST00000442151 BANK1Q8NDB2 785 aa8.81□□□□□ -1
CD44-211ENST00000442151 BRF1Q92994 677 aa8.81□□□□□ -1
CD44-211ENST00000442151 ZNF274Q96GC6 653 aaPredicted RBP8.81□□□□□ -1
CD44-211ENST00000442151 NAP1L4Q99733 375 aaKnown RBP8.81□□□□□ -1
CD44-211ENST00000442151 TM6SF1Q9BZW5 370 aa8.81□□□□□ -1
CD44-211ENST00000442151 NSUN3Q9H649 340 aaKnown RBP8.81□□□□□ -1
CD44-211ENST00000442151 PCDHA10Q9Y5I2 948 aa8.81□□□□□ -1
CD44-211ENST00000442151 IGKV6D-21A0A0A0MT36 114 aa8.8□□□□□ -1
CD44-211ENST00000442151 LCHNA4D1U4 455 aa8.8□□□□□ -1
CD44-211ENST00000442151 C5orf67F2Z3F1 127 aa8.8□□□□□ -1
CD44-211ENST00000442151 IFNAR1P17181 557 aa8.8□□□□□ -1
CD44-211ENST00000442151 KLRC1P26715 233 aa8.8□□□□□ -1
CD44-211ENST00000442151 CIITAP33076 1130 aa8.8□□□□□ -1
CD44-211ENST00000442151 CTNNB1P35222 781 aa8.8□□□□□ -1
CD44-211ENST00000442151 FOXK1P85037 733 aa8.8□□□□□ -1
CD44-211ENST00000442151 APOBRQ0VD83 1088 aa8.8□□□□□ -1
CD44-211ENST00000442151 LPIN1Q14693 890 aa8.8□□□□□ -1
CD44-211ENST00000442151 ADCK5Q3MIX3 580 aa8.8□□□□□ -1
CD44-211ENST00000442151 LEXMQ3ZCV2 418 aa8.8□□□□□ -1
CD44-211ENST00000442151 ERICH6BQ5W0A0 696 aa8.8□□□□□ -1
CD44-211ENST00000442151 MTHFD1LQ6UB35 978 aa8.8□□□□□ -1
CD44-211ENST00000442151 ABHD15Q6UXT9 468 aa8.8□□□□□ -1
CD44-211ENST00000442151 RUFY3Q7L099 469 aa8.8□□□□□ -1
CD44-211ENST00000442151 IFNLR1Q8IU57 520 aaPredicted RBP8.8□□□□□ -1
CD44-211ENST00000442151 CMTR2Q8IYT2 770 aaKnown RBP8.8□□□□□ -1
CD44-211ENST00000442151 RDM1Q8NG50 284 aa8.8□□□□□ -1
CD44-211ENST00000442151 GDPD5Q8WTR4 605 aa8.8□□□□□ -1
CD44-211ENST00000442151 RSPH1Q8WYR4 309 aa8.8□□□□□ -1
CD44-211ENST00000442151 P2RX5Q93086 422 aa8.8□□□□□ -1
CD44-211ENST00000442151 RIT2Q99578 217 aa8.8□□□□□ -1
CD44-211ENST00000442151 UPF3BQ9BZI7 483 aaKnown RBP8.8□□□□□ -1
CD44-211ENST00000442151 FAM49AQ9H0Q0 323 aaPredicted RBP8.8□□□□□ -1
CD44-211ENST00000442151 MTUS1Q9ULD2 1270 aa8.8□□□□□ -1
CD44-211ENST00000442151 PCDHB7Q9Y5E2 793 aa8.8□□□□□ -1
CD44-211ENST00000442151 SNX14Q9Y5W7 946 aa8.8□□□□□ -1
CD44-211ENST00000442151 NID2Q14112 1375 aa8.8□□□□□ -1
CD44-211ENST00000442151 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.8□□□□□ -1
CD44-211ENST00000442151 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.8□□□□□ -1
CD44-211ENST00000442151 WDR64B1ANS9 1081 aa8.8□□□□□ -1
CD44-211ENST00000442151 HOXA2O43364 376 aa8.8□□□□□ -1
CD44-211ENST00000442151 LPXNO60711 386 aa8.8□□□□□ -1
CD44-211ENST00000442151 RPS6KA5O75582 802 aa8.8□□□□□ -1
CD44-211ENST00000442151 JAK3P52333 1124 aa8.8□□□□□ -1
CD44-211ENST00000442151 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
CD44-211ENST00000442151 EVCP57679 992 aa8.8□□□□□ -1
CD44-211ENST00000442151 BMS1Q14692 1282 aaKnown RBP8.8□□□□□ -1
CD44-211ENST00000442151 MARCH8Q5T0T0 291 aa8.8□□□□□ -1
CD44-211ENST00000442151 SWSAP1Q6NVH7 229 aa8.8□□□□□ -1
CD44-211ENST00000442151 RUFY4Q6ZNE9 571 aa8.8□□□□□ -1
CD44-211ENST00000442151 PLPP6Q8IY26 295 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms