RNA–Protein interactions for RNA: ENST00000441588.5

RPE-212, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 4

Gene RPE, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-212ENST00000441588 SIT1Q9Y3P8 196 aa10.63□□□□□ -0.71
RPE-212ENST00000441588 PCDHB7Q9Y5E2 793 aa10.63□□□□□ -0.71
RPE-212ENST00000441588 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 C1QTNF9BB2RNN3 333 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 PROS1P07225 676 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 C1QTNF9P0C862 333 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 HOXA13P31271 388 aaPredicted RBP10.62□□□□□ -0.71
RPE-212ENST00000441588 IGBP1P78318 339 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 LPAL2Q16609 132 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 QRICH1Q2TAL8 776 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
RPE-212ENST00000441588 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 KCNV1Q6PIU1 500 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 OTOP3Q7RTS5 596 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 MCF2L2Q86YR7 1114 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 FTSJ3Q8IY81 847 aaKnown RBP10.62□□□□□ -0.71
RPE-212ENST00000441588 PJA1Q8NG27 643 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 EPC1Q9H2F5 836 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 DZANK1Q9NVP4 752 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 PUF60Q9UHX1 559 aaKnown RBP10.62□□□□□ -0.71
RPE-212ENST00000441588 TRPV2Q9Y5S1 764 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 EVPLQ92817 2033 aa10.62□□□□□ -0.71
RPE-212ENST00000441588 IGSF9BQ9UPX0 1349 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 MBLAC1A4D2B0 266 aaPredicted RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 NCLP19338 710 aaKnown RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 HSD17B4P51659 736 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 CSTF1Q05048 431 aaKnown RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 MARCH8Q5T0T0 291 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 N4BP2L1Q5TBK1 243 aaPredicted RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 METTL7BQ6UX53 244 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 LRRC55Q6ZSA7 311 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 MRPL43Q8N983 215 aaKnown RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 ST13P5Q8NFI4 369 aaPredicted RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 TOMM22Q9NS69 142 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 SPATA6Q9NWH7 488 aaPredicted RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 IGSF9Q9P2J2 1179 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 GMEB2Q9UKD1 530 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 DOCK6Q96HP0 2047 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 MAST4O15021 2626 aa10.61□□□□□ -0.71
RPE-212ENST00000441588 ASH1LQ9NR48 2969 aaKnown RBP10.61□□□□□ -0.71
RPE-212ENST00000441588 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.6□□□□□ -0.71
RPE-212ENST00000441588 ORC4O43929 436 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 GDF9O60383 454 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 SRFP11831 508 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 CCND2P30279 289 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
RPE-212ENST00000441588 ZNF528Q3MIS6 628 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 PHLDB3Q6NSJ2 640 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 TSSK4Q6SA08 328 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 VSIG10LQ86VR7 867 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 ADGRF4Q8IZF3 695 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 ATRIPQ8WXE1 791 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 ZNF558Q96NG5 402 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 ADAM2Q99965 735 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 RNF19AQ9NV58 838 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 MRPL11Q9Y3B7 192 aaKnown RBP10.6□□□□□ -0.71
RPE-212ENST00000441588 PCDHGA2Q9Y5H1 932 aa10.6□□□□□ -0.71
RPE-212ENST00000441588 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
RPE-212ENST00000441588 WDFY3Q8IZQ1 3526 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 LAMTOR5O43504 91 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 SMARCA5O60264 1052 aaPredicted RBP10.59□□□□□ -0.71
RPE-212ENST00000441588 LILRB5O75023 590 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 TGFB3P10600 412 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 GBP2P32456 591 aaPredicted RBP10.59□□□□□ -0.71
RPE-212ENST00000441588 PPM1AP35813 382 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 SHC2P98077 582 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 CABP7Q86V35 215 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 SLC44A3Q8N4M1 653 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 ZBTB44Q8NCP5 570 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 SLC22A17Q8WUG5 538 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 TRAPPC12Q8WVT3 735 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
RPE-212ENST00000441588 DENND3A2RUS2 1198 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
RPE-212ENST00000441588 C9IYK1 514 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 NT5C1B-RDH14C9J2C7 533 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 M0QZ92 97 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 DHX16O60231 1041 aaKnown RBP10.58□□□□□ -0.72
RPE-212ENST00000441588 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
RPE-212ENST00000441588 METAP2P50579 478 aaKnown RBP eCLIP10.58□□□□□ -0.72
RPE-212ENST00000441588 KRT17Q04695 432 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 PTPN14Q15678 1187 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 LETM2Q2VYF4 491 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 GPATCH4Q5T3I0 446 aaKnown RBP10.58□□□□□ -0.72
RPE-212ENST00000441588 IER5Q5VY09 327 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 DCLRE1AQ6PJP8 1040 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 STOX1Q6ZVD7 989 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 SIRT2Q8IXJ6 389 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 SLC39A11Q8N1S5 342 aa10.58□□□□□ -0.72
RPE-212ENST00000441588 CASD1Q96PB1 797 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms