RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 C6orf222P0C671 652 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 FBLN1P23142 703 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 ZAP70P43403 619 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 HAAOP46952 286 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 SULT1E1P49888 294 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 NLRP5P59047 1200 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 PTPN12Q05209 780 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 WDR24Q96S15 920 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 NAA15Q9BXJ9 866 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 NRDE2Q9H7Z3 1164 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 GRPEL1Q9HAV7 217 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 ERC2O15083 957 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-206ENST00000441438 BRINP1O60477 761 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
SYNE2-206ENST00000441438 GOSR1O95249 250 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 NPPAP01160 153 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 IDUAP35475 653 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 BEX3Q00994 111 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 GPS2Q13227 327 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-206ENST00000441438 C2orf27AQ580R0 203 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 ARHGAP11AQ6P4F7 1023 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 ARMC2Q8NEN0 867 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 RASGRP4Q8TDF6 673 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 COL26A1Q96A83 441 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 FSD1Q9BTV5 496 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 CCDC87Q9NVE4 849 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 DACT1Q9NYF0 836 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 A0A1B0GUL7 405 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 RNF113AO15541 343 aaKnown RBP11.53□□□□□ -0.56
SYNE2-206ENST00000441438 FRS3O43559 492 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 TLR5O60602 858 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 KRBOX4Q5JUW0 171 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 TPGS2Q68CL5 300 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 EYA1Q99502 592 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 PLAAQ9Y263 795 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 HCN4Q9Y3Q4 1203 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
SYNE2-206ENST00000441438 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 DDX11L8A8MPP1 907 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 UBXN8O00124 270 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 YEATS4O95619 227 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 IGHA2P01877 340 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 EEF2P13639 858 aaKnown RBP11.52□□□□□ -0.56
SYNE2-206ENST00000441438 ELF1P32519 619 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 UBXN1Q04323 297 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 USP4Q13107 963 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 KDELC2Q7Z4H8 507 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 NPLOC4Q8TAT6 608 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 ADAMTS18Q8TE60 1221 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 NOC3LQ8WTT2 800 aaKnown RBP11.52□□□□□ -0.56
SYNE2-206ENST00000441438 HDAC2Q92769 488 aaKnown RBP11.52□□□□□ -0.56
SYNE2-206ENST00000441438 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 SEPT11Q9NVA2 429 aaKnown RBP11.52□□□□□ -0.56
SYNE2-206ENST00000441438 HOOK1Q9UJC3 728 aaKnown RBP11.52□□□□□ -0.56
SYNE2-206ENST00000441438 JAG2Q9Y219 1238 aa11.52□□□□□ -0.56
SYNE2-206ENST00000441438 RGPD1P0DJD0 1748 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 GLI3P10071 1580 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 MTHFSP49914 203 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 CRY1Q16526 586 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 RUFY2Q8WXA3 655 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 EZH1Q92800 747 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-206ENST00000441438 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 TCF12Q99081 682 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 PTCH2Q9Y6C5 1203 aa11.52□□□□□ -0.57
SYNE2-206ENST00000441438 TRAV6A0A075B6T7 132 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 RIPK2O43353 540 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 MTX1Q13505 466 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NOLC1Q14978 699 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NEK5Q6P3R8 708 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 IKBIPQ70UQ0 350 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 PANK2Q9BZ23 570 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 FBRSQ9HAH7 460 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NSD3Q9BZ95 1437 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 CAPN9O14815 690 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NPTX2P47972 431 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 GJA9P57773 515 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 AKAP4Q5JQC9 854 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 ZNF362Q5T0B9 420 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-206ENST00000441438 FCRLBQ6BAA4 426 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NANOGNBQ7Z5D8 188 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 PIBF1Q8WXW3 757 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 ZBTB21Q9ULJ3 1066 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 GPR34Q9UPC5 381 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 COL24A1Q17RW2 1714 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 PKD1L3Q7Z443 1732 aa11.51□□□□□ -0.57
SYNE2-206ENST00000441438 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms