RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 STARD7Q9NQZ5 370 aa8.48□□□□□ -1.05
COPS3-203ENST00000439936 SMC3Q9UQE7 1217 aa8.48□□□□□ -1.05
COPS3-203ENST00000439936 GPSM3Q9Y4H4 160 aa8.48□□□□□ -1.05
COPS3-203ENST00000439936 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.48□□□□□ -1.05
COPS3-203ENST00000439936 DNAH12Q6ZR08 3092 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 KAT6AQ92794 2004 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 TRIP12Q14669 1992 aaPredicted RBP8.47□□□□□ -1.05
COPS3-203ENST00000439936 GRIN2DO15399 1336 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 CYP3A7-CYP3A51PA0A087WV96 503 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 GSTTP1A0A1W2PQM5 241 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
COPS3-203ENST00000439936 ARVCFO00192 962 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 DHX15O43143 795 aaKnown RBP8.47□□□□□ -1.05
COPS3-203ENST00000439936 CABYRO75952 493 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 MMP3P08254 477 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 CYP3A7P24462 503 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 GRM5P41594 1212 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 RTP1P59025 263 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 PSMC6P62333 389 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 VAC14Q08AM6 782 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 ITGA7Q13683 1181 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 DGKDQ16760 1214 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 PRR16Q569H4 304 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 LARP1BQ659C4 914 aaKnown RBP8.47□□□□□ -1.05
COPS3-203ENST00000439936 METTL7BQ6UX53 244 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 GIMAP8Q8ND71 665 aaPredicted RBP8.47□□□□□ -1.05
COPS3-203ENST00000439936 PPTC7Q8NI37 304 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 FAM174AQ8TBP5 190 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 KAT2BQ92831 832 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 LENG9Q96B70 501 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 MBOAT7Q96N66 472 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 GPR20Q99678 358 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 AGO4Q9HCK5 861 aaKnown RBP8.47□□□□□ -1.05
COPS3-203ENST00000439936 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 KIF3AQ9Y496 699 aa8.47□□□□□ -1.05
COPS3-203ENST00000439936 WDR81Q562E7 1941 aa8.46□□□□□ -1.05
COPS3-203ENST00000439936 NFASCO94856 1347 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 IPO5O00410 1097 aaKnown RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 TDP2O95551 362 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 ADH1CP00326 375 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 HOXD8P13378 290 aaPredicted RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 SP4Q02446 784 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 TLE2Q04725 743 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 PTK2Q05397 1052 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 NR1H3Q13133 447 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 ITGB3BPQ13352 177 aaPredicted RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 SNX17Q15036 470 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 SAFBQ15424 915 aaKnown RBP eCLIP8.46□□□□□ -1.06
COPS3-203ENST00000439936 LETM2Q2VYF4 491 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 Q4G0T1 1027 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 C1orf53Q5VUE5 145 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 PPP4R3AQ6IN85 833 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 MOXD1Q6UVY6 613 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 NEK8Q86SG6 692 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 SLC43A3Q8NBI5 491 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 PPP1R13LQ8WUF5 828 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 SEPT1Q8WYJ6 367 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 INTS4Q96HW7 963 aaKnown RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 PKNOX2Q96KN3 472 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 ZFP42Q96MM3 310 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 ZNF577Q9BSK1 485 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 C16orf70Q9BSU1 422 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 MTG1Q9BT17 334 aaPredicted RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 FOXP1Q9H334 677 aaPredicted RBP8.46□□□□□ -1.06
COPS3-203ENST00000439936 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 ATP11BQ9Y2G3 1177 aa8.46□□□□□ -1.06
COPS3-203ENST00000439936 SCN10AQ9Y5Y9 1956 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 A0A0U1RQG5 324 aaPredicted RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 POM121CA8CG34 1229 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 KIF28PB7ZC32 967 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 DDX39AO00148 427 aaKnown RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 HAS3O00219 553 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 NOP56O00567 594 aaKnown RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 MSH4O15457 936 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 CCNT1O60563 726 aaKnown RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 ATG7O95352 703 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 VSIG8P0DPA2 414 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 ATP2B1P20020 1258 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 U2AF2P26368 475 aaKnown RBP eCLIP8.45□□□□□ -1.06
COPS3-203ENST00000439936 WDR4P57081 412 aaKnown RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 TRIM60Q495X7 471 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 UTP14CQ5TAP6 766 aaKnown RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 GJA10Q969M2 543 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 SDF4Q9BRK5 362 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 ARHGAP9Q9BRR9 750 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 C1QTNF2Q9BXJ5 285 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 ZFAND3Q9H8U3 227 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 TBC1D22BQ9NU19 505 aa8.45□□□□□ -1.06
COPS3-203ENST00000439936 MYH9P35579 1960 aaKnown RBP8.45□□□□□ -1.06
COPS3-203ENST00000439936 DCDC2CA8MYV0 355 aa8.44□□□□□ -1.06
COPS3-203ENST00000439936 H3BRB1 525 aa8.44□□□□□ -1.06
COPS3-203ENST00000439936 SLC37A4O43826 429 aa8.44□□□□□ -1.06
COPS3-203ENST00000439936 PSMD10O75832 226 aa8.44□□□□□ -1.06
COPS3-203ENST00000439936 CCNE2O96020 404 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms